RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 H0YIV9 168 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 CDC123O75794 336 aaPredicted RBP14.94□□□□□ -0.02
CHD3-215ENST00000572750 OTCP00480 354 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 FAM87AP0C7U9 286 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 SMIM10L1P0DMW3 83 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 IMPDH1P20839 514 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 SERPINB1P30740 379 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 SKP1P63208 163 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 CLCQ05315 142 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 ZRSR2Q15696 482 aaKnown RBP14.94□□□□□ -0.02
CHD3-215ENST00000572750 ADPRMQ3LIE5 342 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 MFSD4BQ5TF39 518 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 TRIM40Q6P9F5 258 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 LAPTM4BQ86VI4 370 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 CCNYL1Q8N7R7 359 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 OR2L5Q8NG80 312 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 RDH11Q8TC12 318 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 THAP4Q8WY91 577 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 PEX11GQ96HA9 241 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 SMIM10Q96HG1 83 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 FAM111AQ96PZ2 611 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 NTMT1Q9BV86 223 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 GSTO2Q9H4Y5 243 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 SLC17A7Q9P2U7 560 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 C3orf18Q9UK00 162 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 PLLPQ9Y342 182 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 KCNMB2Q9Y691 235 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 LRBAP50851 2863 aa14.94□□□□□ -0.02
CHD3-215ENST00000572750 IDSB3KWA1 339 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 SAP18O00422 153 aaKnown RBP14.93□□□□□ -0.02
CHD3-215ENST00000572750 CTIFO43310 598 aaKnown RBP14.93□□□□□ -0.02
CHD3-215ENST00000572750 DNAJB5O75953 348 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 BMP10O95393 424 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 TGFB1P01137 390 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 CPA3P15088 417 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 CERS1P27544 350 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 NEK2P51955 445 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 POLE2P56282 527 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 RPS13P62277 151 aaKnown RBP14.93□□□□□ -0.02
CHD3-215ENST00000572750 BTN3A2P78410 334 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 SSPNQ14714 243 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 PCLAFQ15004 111 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 LINC00303Q3SY05 128 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 MINDY4Q4G0A6 757 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 GGTA1PQ4G0N0 100 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 FAAH2Q6GMR7 532 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 LRIG3Q6UXM1 1119 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 WDR20Q8TBZ3 569 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 REPS1Q96D71 796 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 CCDC126Q96EE4 140 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 FAR2Q96K12 515 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 TRIM55Q9BYV6 548 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 TGIF2Q9GZN2 237 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 OR51B5Q9H339 312 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 ZNF225Q9UK10 706 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 PCDHGA11Q9Y5H2 935 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 HS3ST3B1Q9Y662 390 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 SCN2AQ99250 2005 aa14.93□□□□□ -0.02
CHD3-215ENST00000572750 OR2W5A6NFC9 320 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MAGEB17A8MXT2 336 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MASP2O00187 686 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 RTCAO00442 366 aaKnown RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 SOCS6O14544 535 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 CHST10O43529 356 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 ALOX12BO75342 701 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 OR4F21O95013 312 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 HEXBP07686 556 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MMP11P24347 488 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 HPDP32754 393 aaPredicted RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 PIK3CBP42338 1070 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 CCR10P46092 362 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 PHEXP78562 749 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 LCP2Q13094 533 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 TCHHL1Q5QJ38 904 aaPredicted RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 KHDRBS2Q5VWX1 349 aaKnown RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 TTC19Q6DKK2 380 aaPredicted RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 NIPAL1Q6NVV3 410 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 ABHD17CQ6PCB6 329 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 GPRIN3Q6ZVF9 776 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MILR1Q7Z6M3 343 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 C10orf107Q8IVU9 208 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 TCP10LQ8TDR4 215 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 APOBEC4Q8WW27 367 aaKnown RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 C8orf44Q96CB5 159 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MTFMTQ96DP5 389 aaKnown RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 CMTM7Q96FZ5 175 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 QRFPRQ96P65 431 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 ZNF382Q96SR6 550 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 ARHGAP9Q9BRR9 750 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MECRQ9BV79 373 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 SORBS1Q9BX66 1292 aaKnown RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 VN1R1Q9GZP7 353 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 COPS7BQ9H9Q2 264 aaPredicted RBP14.92□□□□□ -0.02
CHD3-215ENST00000572750 SEMA3GQ9NS98 782 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 OXSMQ9NWU1 459 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 P4HTMQ9NXG6 502 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 SENP1Q9P0U3 644 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 TRPS1Q9UHF7 1281 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 MID2Q9UJV3 735 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms