RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 TMTC4Q5T4D3 741 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 C10orf62Q5T681 223 aaPredicted RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 CRTC1Q6UUV9 634 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 LINGO4Q6UY18 593 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 C4orf22Q6V702 233 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 RANBP10Q6VN20 620 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF517Q6ZMY9 492 aaPredicted RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 LIX1LQ8IVB5 337 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 SLC35F3Q8IY50 421 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF567Q8N184 647 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 FBXO39Q8N4B4 442 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 TTC30BQ8N4P2 665 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 ATPAF2Q8N5M1 289 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 METTL25Q8N6Q8 603 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 GLIS1Q8NBF1 620 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 RAB7BQ96AH8 199 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 SGF29Q96ES7 293 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF641Q96N77 438 aaPredicted RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 SPATA13Q96N96 652 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 SIGLEC11Q96RL6 698 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 LYSMD1Q96S90 227 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 SEMA3CQ99985 751 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 CCDC3Q9BQI4 270 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 UNKQ9C0B0 810 aaKnown RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 STRADBQ9C0K7 418 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 SLC25A51Q9H1U9 297 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 ANKZF1Q9H8Y5 726 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 PAPOLBQ9NRJ5 636 aaKnown RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 APOBEC3BQ9UH17 382 aaKnown RBP4.68□□□□□ -1.66
KARSP3-201ENST00000571212 HPCAL4Q9UM19 191 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 TTLL3Q9Y4R7 772 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 HEY1Q9Y5J3 304 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 NBASA2RRP1 2371 aa4.68□□□□□ -1.66
KARSP3-201ENST00000571212 A0A1W2PQ67 120 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 IGLON5A6NGN9 336 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 KCNK1O00180 336 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RAB27BO00194 218 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 DFFAO00273 331 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 AREL1O15033 823 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 NVLO15381 856 aaKnown RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 INSIG1O15503 277 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SYF2O95926 243 aaKnown RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 JCHAINP01591 159 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 LIPCP11150 499 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SLC5A2P31639 672 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CCKBRP32239 447 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 UGT1A5P35504 534 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 MAGEA3P43357 314 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CCT5P48643 541 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SUOXP51687 545 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 PGDP52209 483 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 THOP1P52888 689 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RPL26P61254 145 aaKnown RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SNRPD1P62314 119 aaKnown RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 YPEL5P62699 121 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 DYNLT1P63172 113 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CNGA3Q16281 694 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 ZNF750Q32MQ0 723 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 ANKRD20A2Q5SQ80 823 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 ANKRD20A1Q5TYW2 823 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 ANKRD20A3Q5VUR7 823 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 LVRNQ6Q4G3 990 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 KDELC1Q6UW63 502 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 MACC1Q6ZN28 852 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RAB11FIP2Q7L804 512 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 LCA5Q86VQ0 697 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CDKL3Q8IVW4 592 aaPredicted RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RBFAQ8N0V3 343 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 FSTL5Q8N475 847 aaPredicted RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 MMGT1Q8N4V1 131 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 OR6C4Q8NGE1 309 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 DTX3LQ8TDB6 740 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 PIH1D2Q8WWB5 315 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 C1orf54Q8WWF1 131 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CENPTQ96BT3 561 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 HAUS1Q96CS2 278 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 OXNAD1Q96HP4 312 aaPredicted RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RUNDC3BQ96NL0 473 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 MCCC1Q96RQ3 725 aaPredicted RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 TMEM121Q9BTD3 319 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 LRRC61Q9BV99 259 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 POLR1EQ9GZS1 481 aaKnown RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CLPBQ9H078 707 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 GBA3Q9H227 469 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 TCEAL2Q9H3H9 227 aaPredicted RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 NOD2Q9HC29 1040 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 PCDH9Q9HC56 1237 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SNX15Q9NRS6 342 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RBM22Q9NW64 420 aaKnown RBP eCLIP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SMARCAL1Q9NZC9 954 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 CIDEBQ9UHD4 219 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 TMCO1Q9UM00 188 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 RPL26L1Q9UNX3 145 aaKnown RBP4.67□□□□□ -1.66
KARSP3-201ENST00000571212 SDK2Q58EX2 2172 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 ANKRD36A6QL64 1941 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 FLNCQ14315 2725 aa4.67□□□□□ -1.66
KARSP3-201ENST00000571212 MBD3L4A6NDZ8 208 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms