RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FAM72BQ86X60 149 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RASGRP3Q8IV61 690 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CCDC28AQ8IWP9 274 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 YAF2Q8IY57 180 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 MMP21Q8N119 569 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TMEM86AQ8N2M4 240 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 KLHL36Q8N4N3 616 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ALLCQ8N6M5 410 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 OR56B1Q8NGI3 324 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLC35B2Q8TB61 432 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 GPBAR1Q8TDU6 330 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ADAMTS16Q8TE57 1224 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 GLYATL2Q8WU03 294 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PYDC1Q8WXC3 89 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SNX19Q92543 992 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RAB1CQ92928 201 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLCO2A1Q92959 643 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ART4Q93070 314 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RFT1Q96AA3 541 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 MIB2Q96AX9 1013 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF707Q96C28 371 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 DAZAP1Q96EP5 407 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 DTD2Q96FN9 168 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RMND5BQ96G75 393 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 SMARCD1Q96GM5 515 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PLEKHA8Q96JA3 519 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF333Q96JL9 665 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SERAC1Q96JX3 654 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF514Q96K75 400 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 HSFY1Q96LI6 401 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LRFN5Q96NI6 719 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CCT8L2Q96SF2 557 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NPY6RQ99463 290 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PAFAH2Q99487 392 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ASCL2Q99929 193 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 WDR83Q9BRX9 315 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 INPP5KQ9BT40 448 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TMEM109Q9BVC6 243 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CALN1Q9BXU9 219 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 POTEKPQ9BYX7 375 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 FRMD8Q9BZ67 464 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 ROPN1BQ9BZX4 212 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 TRIM15Q9C019 465 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 DHX35Q9H5Z1 703 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 CWH43Q9H720 699 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ASB8Q9H765 288 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 CATSPERBQ9H7T0 1116 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 COG4Q9H9E3 785 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ROPN1Q9HAT0 212 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 SMURF2Q9HAU4 748 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 RNPEPL1Q9HAU8 725 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NMUR1Q9HB89 426 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LRRC4Q9HBW1 653 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TMBIM4Q9HC24 238 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SLC40A1Q9NP59 571 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PIGVQ9NUD9 493 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PLCXD1Q9NUJ7 323 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMG6-208ENST00000570874 ARMC1Q9NVT9 282 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 MRPL22Q9NWU5 206 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 OSER1Q9NX31 292 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TMEM161AQ9NX61 479 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 NDE1Q9NXR1 346 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 WSB2Q9NYS7 404 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 PDP1Q9P0J1 537 aaPredicted RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 FBXL17Q9UF56 701 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 SERGEFQ9UGK8 458 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNHIT2Q9UHR6 403 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LCMT1Q9UIC8 334 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LNPEPQ9UIQ6 1025 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ZNF229Q9UJW7 825 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 ADAM28Q9UKQ2 775 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 TBX21Q9UL17 535 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 UTP11Q9Y3A2 253 aaKnown RBP3.42□□□□□ -1.86
SMG6-208ENST00000570874 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMG6-208ENST00000570874 TSC22D4Q9Y3Q8 395 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 LRRC42Q9Y546 428 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PCDHB7Q9Y5E2 793 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 V9GYQ6 96 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PCM1Q15154 2024 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 COL4A3Q01955 1670 aa3.42□□□□□ -1.86
SMG6-208ENST00000570874 PLXNA2O75051 1894 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 CEP192Q8TEP8 1941 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 MKI67P46013 3256 aaKnown RBP3.41□□□□□ -1.86
SMG6-208ENST00000570874 A0A1W2PPV4 95 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PRSS38A1L453 326 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PIPSLA2A3N6 862 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FUOMA2VDF0 154 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 PRAMEF27A3QJZ7 478 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A18PA6NE21 464 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A16PA6NEW6 464 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SDR42E2A6NKP2 422 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SMIM23A6NLE4 172 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A9PA6NNJ1 464 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 SOBPA7XYQ1 873 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM171A2A8MVW0 826 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 FAM90A5PA8MXJ8 464 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 H7C0C1 242 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 H7C1Q1 480 aa3.41□□□□□ -1.86
SMG6-208ENST00000570874 TMEM189-UBE2V1I3L0A0 370 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms