RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 FRG2Q64ET8 278 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 FAM151BQ6UXP7 276 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 DDX53Q86TM3 631 aaKnown RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 MAGEB10Q96LZ2 347 aaPredicted RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 FRG2BQ96QU4 278 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 DUSP26Q9BV47 211 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 POLR2J2Q9GZM3 115 aaKnown RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 MIXL1Q9H2W2 232 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 ANKRA2Q9H9E1 313 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 RBFOX1Q9NWB1 397 aaKnown RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 SLC6A14Q9UN76 642 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 PDPK1O15530 556 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 TPST2O60704 377 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 FHP07954 510 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 IFI30P13284 250 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 CNR2P34972 360 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 CRISP1P54107 249 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 TWF1Q12792 350 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 MLLT11Q13015 90 aaPredicted RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 HNRNPA0Q13151 305 aaKnown RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 DOC2BQ14184 412 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 NCF4Q15080 339 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 PTPRRQ15256 657 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 MRPL10Q7Z7H8 261 aaKnown RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 CLDN19Q8N6F1 224 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 L3MBTL4Q8NA19 623 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 OR4M1Q8NGD0 313 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 PIH1D2Q8WWB5 315 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 SH3KBP1Q96B97 665 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 COPS8Q99627 209 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 ARHGAP39Q9C0H5 1083 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 NARFLQ9H6Q4 476 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 SLC25A19Q9HC21 320 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 PAK6Q9NQU5 681 aaPredicted RBP14.8□□□□□ -0.04
SMG6-207ENST00000570756 FTSJ1Q9UET6 329 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 BTNL2Q9UIR0 455 aa14.8□□□□□ -0.04
SMG6-207ENST00000570756 PCM1Q15154 2024 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 ARRDC5A6NEK1 342 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 AKR7A2O43488 359 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 AP2A2O94973 939 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 F11P03951 625 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 ACADMP11310 421 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 CKMT1AP12532 417 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 TNFRSF1BP20333 461 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 ITGALP20701 1170 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 TGM4P49221 684 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 CDH4P55283 916 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 C21orf58P58505 322 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 SNRPD2P62316 118 aaKnown RBP14.79□□□□□ -0.04
SMG6-207ENST00000570756 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.79□□□□□ -0.04
SMG6-207ENST00000570756 LYPLAL1Q5VWZ2 237 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 TLK2Q86UE8 772 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 FAM217AQ8IXS0 508 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 UBE2J2Q8N2K1 259 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 DUSP18Q8NEJ0 188 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 KLHDC9Q8NEP7 349 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 NLGN4YQ8NFZ3 816 aaPredicted RBP14.79□□□□□ -0.04
SMG6-207ENST00000570756 CDC26Q8NHZ8 85 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 DNAJA4Q8WW22 397 aaPredicted RBP14.79□□□□□ -0.04
SMG6-207ENST00000570756 TRMT61AQ96FX7 289 aaKnown RBP14.79□□□□□ -0.04
SMG6-207ENST00000570756 B3GALT6Q96L58 329 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 HYLS1Q96M11 299 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 PIP5K1AQ99755 562 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 ASB8Q9H765 288 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 FZD3Q9NPG1 666 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 MAT2BQ9NZL9 334 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 STOML2Q9UJZ1 356 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 PCDHB8Q9UN66 801 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 TRPV2Q9Y5S1 764 aa14.79□□□□□ -0.04
SMG6-207ENST00000570756 C1orf226A1L170 272 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 MYL12BO14950 172 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 ENTPD6O75354 484 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 TRBC1P01850 177 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 OPN1SWP03999 348 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 SLC2A2P11168 524 aaPredicted RBP14.78□□□□□ -0.04
SMG6-207ENST00000570756 LAMP1P11279 417 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 MYL12AP19105 171 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 CBLP22681 906 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 OR1E2P47887 323 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 SLC9A3P48764 834 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 SNRPGP62308 76 aaKnown RBP14.78□□□□□ -0.04
SMG6-207ENST00000570756 TOR2AQ5JU69 321 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 DGKKQ5KSL6 1271 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 FRMPD2BQ6IN97 320 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 MACC1Q6ZN28 852 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 ZNF557Q8N988 423 aaPredicted RBP14.78□□□□□ -0.04
SMG6-207ENST00000570756 AQP11Q8NBQ7 271 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 PROKR2Q8NFJ6 384 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 GEMIN6Q8WXD5 167 aaKnown RBP14.78□□□□□ -0.04
SMG6-207ENST00000570756 AP2M1Q96CW1 435 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 TCF25Q9BQ70 676 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 PRSS21Q9Y6M0 314 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 PLXNA4Q9HCM2 1894 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 CBX4O00257 560 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 ORC5O43913 435 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 GCM2O75603 506 aaPredicted RBP14.78□□□□□ -0.04
SMG6-207ENST00000570756 GADD45GO95257 159 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 HLA-DQB1P01920 261 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 CBSLP0DN79 551 aa14.78□□□□□ -0.04
SMG6-207ENST00000570756 CBSP35520 551 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms