RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PCBD2Q9H0N5 130 aa14.3□□□□□ -0.12
RAB40B-203ENST00000570676 ZNF160Q9HCG1 818 aa14.3□□□□□ -0.12
RAB40B-203ENST00000570676 MKKSQ9NPJ1 570 aaPredicted RBP14.3□□□□□ -0.12
RAB40B-203ENST00000570676 NTNG1Q9Y2I2 539 aa14.3□□□□□ -0.12
RAB40B-203ENST00000570676 SCN3AQ9NY46 2000 aa14.3□□□□□ -0.12
RAB40B-203ENST00000570676 KCNE1BA0A087WTH5 132 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 H2AFYO75367 372 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 STK16O75716 305 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 WDR47O94967 919 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 CCND1P24385 295 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 MDH1P40925 334 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 BCL6P41182 706 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 GDF5P43026 501 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 SLC6A12P48065 614 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 GYS2P54840 703 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 RPS15AP62244 130 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 MAT1AQ00266 395 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 MRPL49Q13405 166 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 PCBP2Q15366 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 CFAP157Q5JU67 520 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 AGAP7PQ5VUJ5 663 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 ZCCHC23Q6ZST2 131 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 PRSS41Q7RTY9 318 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 MTERF4Q7Z6M4 381 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 C17orf64Q86WR6 236 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 TRIM42Q8IWZ5 723 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 OR56A3Q8NH54 315 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 PYCR2Q96C36 320 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 MOCOSQ96EN8 888 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 THOC3Q96J01 351 aaKnown RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 VPS50Q96JG6 964 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 AGAP4Q96P64 663 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 GATA5Q9BWX5 397 aaPredicted RBP14.29□□□□□ -0.12
RAB40B-203ENST00000570676 SLC29A3Q9BZD2 475 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 ASF1BQ9NVP2 202 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 OPTCQ9UBM4 332 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 ASB1Q9Y576 335 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 HIVEP3Q5T1R4 2406 aa14.29□□□□□ -0.12
RAB40B-203ENST00000570676 LOC102723996A0A087X1L8 192 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 IGHV1-45A0A0A0MS14 117 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 FEZF1A0PJY2 475 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 K7EPI3 171 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 SUPT7LO94864 414 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 NSA2O95478 260 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 SERPINE1P05121 402 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 CDH1P12830 882 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 IL1RNP18510 177 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 VARSP26640 1264 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 SOX11P35716 441 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 EMP2P54851 167 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 GUCY1A3Q02108 690 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 EEF1A2Q05639 463 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 PDK4Q16654 411 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 NDUFA9Q16795 377 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 CAPN13Q6MZZ7 669 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 TMEM214Q6NUQ4 689 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 TMEM205Q6UW68 189 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 LRRC70Q7Z2Q7 622 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 THOC6Q86W42 341 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 KLHDC8AQ8IYD2 350 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 TEX9Q8N6V9 391 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 SNX31Q8N9S9 440 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 OR9A4Q8NGU2 314 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 LRRC8CQ8TDW0 803 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 CKAP2Q8WWK9 683 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 TM4SF19Q96DZ7 209 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 THAP11Q96EK4 314 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 PSMG3-AS1Q96PY0 264 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 OR4K3Q96R72 315 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 BARD1Q99728 777 aaKnown RBP14.28□□□□□ -0.12
RAB40B-203ENST00000570676 MACROD1Q9BQ69 325 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 C1QTNF3Q9BXJ4 246 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 MANSC1Q9H8J5 431 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 DNAJC11Q9NVH1 559 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 PCTPQ9UKL6 214 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 SLC22A14Q9Y267 594 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 ANGPTL3Q9Y5C1 460 aa14.28□□□□□ -0.12
RAB40B-203ENST00000570676 NSG1A0A0A6YYJ2 146 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 BLACEA4D250 179 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 H0YIG0 161 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 E2F3O00716 465 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 LCMT2O60294 686 aaKnown RBP14.27□□□□□ -0.13
RAB40B-203ENST00000570676 SEMA7AO75326 666 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 JRKO75564 520 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 KLHL18O94889 574 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 RNF224P0DH78 156 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 NPPBP16860 134 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 GRK2P25098 689 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 AVPR1BP47901 424 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 PIK3CGP48736 1102 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 STX3Q13277 289 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 MFAP5Q13361 173 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 GTF2H2Q13888 395 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 PCOLCEQ15113 449 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 FHL5Q5TD97 284 aa14.27□□□□□ -0.13
RAB40B-203ENST00000570676 IRAK1BP1Q5VVH5 260 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms