RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KDF1Q8NAX2 398 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 AGR3Q8TD06 166 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF75CPQ92670 426 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 CNTNAP3BQ96NU0 1288 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 CNTNAP3Q9BZ76 1288 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 SLC26A1Q9H2B4 701 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 MANSC1Q9H8J5 431 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 IFT80Q9P2H3 777 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 CTSFQ9UBX1 484 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 RAXQ9Y2V3 346 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 FIS1Q9Y3D6 152 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 RAP2CQ9Y3L5 183 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 URB1O60287 2271 aaKnown RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 TMEM8BA6NDV4 472 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 CRCPO75575 148 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 RAB40ALP0C0E4 278 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 HSD3B1P14060 373 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 WT1P19544 449 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-222ENST00000568034 TCN2P20062 427 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 FBLP22087 321 aaKnown RBP17.03■□□□□ 0.32
COMMD4-222ENST00000568034 HSD3B2P26439 372 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 CERS1P27544 350 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 OLR1P78380 273 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 HMGCS1Q01581 520 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 OVCH1Q7RTY7 1134 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 TRIM46Q7Z4K8 759 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 TRIM42Q8IWZ5 723 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 CLYBLQ8N0X4 340 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 IL22RA1Q8N6P7 574 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 TWIST2Q8WVJ9 160 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 FKBP10Q96AY3 582 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 KCNC2Q96PR1 638 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 THAP1Q9NVV9 213 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 HCN3Q9P1Z3 774 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 IL17BQ9UHF5 180 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 SLC12A4Q9UP95 1085 aa17.03■□□□□ 0.32
COMMD4-222ENST00000568034 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-222ENST00000568034 VSTM2BA6NLU5 285 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 C21orf140B9A014 251 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 KLF7O75840 302 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 SNUPNO95149 360 aaKnown RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 LIFP15018 202 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 HIST1H1TP22492 207 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 ATP5A1P25705 553 aaKnown RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 BSGP35613 385 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 DLSTP36957 453 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 ARFIP1P53367 373 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 RUNX2Q13950 521 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 ATG16L1Q676U5 607 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 OR4C11Q6IEV9 310 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 NIPAL1Q6NVV3 410 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 ZC3H7AQ8IWR0 971 aaKnown RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 SPACA3Q8IXA5 215 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 CA13Q8N1Q1 262 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 METTL4Q8N3J2 472 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 ENDOVQ8N8Q3 282 aaKnown RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 GBP7Q8N8V2 638 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 SRFBP1Q8NEF9 429 aaKnown RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 CKAP2Q8WWK9 683 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 RGMAQ96B86 450 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 SERINC2Q96SA4 455 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 SPSB2Q99619 263 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 TBCDQ9BTW9 1192 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 MRPL1Q9BYD6 325 aaKnown RBP17.02■□□□□ 0.32
COMMD4-222ENST00000568034 DPH1Q9BZG8 443 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 MAP4K5Q9Y4K4 846 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 PCDHGA6Q9Y5G7 932 aa17.02■□□□□ 0.32
COMMD4-222ENST00000568034 A0A0A6YYD5 115 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 C9J4A7 227 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 NPIPB8E9PQR5 432 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 KLK10O43240 276 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 EFSO43281 561 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 CHST10O43529 356 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 EEDO75530 441 aaKnown RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 ALBP02768 609 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 JUNP05412 331 aaKnown RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 TSFMP43897 325 aaKnown RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 EFNA3P52797 238 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 MTTPP55157 894 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 RPS18P62269 152 aaKnown RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 TGM3Q08188 693 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 NKG7Q16617 165 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 XKR7Q5GH72 579 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 FAM69BQ5VUD6 431 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 MLIPQ5VWP3 458 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 Q6ZSR9 355 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 ACOT4Q8N9L9 421 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 OR2T11Q8NH01 316 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 OR51Q1Q8NH59 317 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 C11orf24Q96F05 449 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 ILKAPQ9H0C8 392 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 PRM3Q9NNZ6 103 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 PNPOQ9NVS9 261 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 TRPC4Q9UBN4 977 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 VPS29Q9UBQ0 182 aa17.01■□□□□ 0.31
COMMD4-222ENST00000568034 MRPS18BQ9Y676 258 aaKnown RBP17.01■□□□□ 0.31
COMMD4-222ENST00000568034 CCDC88CQ9P219 2028 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms