RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CACNG4Q9UBN1 327 aa5.12□□□□□ -1.59
CAPN3-217ENST00000567817 SUN2Q9UH99 717 aa5.12□□□□□ -1.59
CAPN3-217ENST00000567817 POLG2Q9UHN1 485 aa5.12□□□□□ -1.59
CAPN3-217ENST00000567817 TRMT6Q9UJA5 497 aaKnown RBP5.12□□□□□ -1.59
CAPN3-217ENST00000567817 LEF1Q9UJU2 399 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF711Q9Y462 761 aa5.12□□□□□ -1.59
CAPN3-217ENST00000567817 DNAJC15Q9Y5T4 150 aa5.12□□□□□ -1.59
CAPN3-217ENST00000567817 ITPR1Q14643 2758 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 A0A1W2PQ67 120 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 DHRS12A0PJE2 317 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 FAM234BA2RU67 622 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PRORSD1PA6NEY8 169 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 NEMP2A6NFY4 417 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SLC38A8A6NNN8 435 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TMEM233B4DJY2 109 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SUPT3HB4E1H0 165 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 H0Y626 953 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 EIF3FO00303 357 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 YY2O15391 372 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 STX7O15400 261 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 MPPED1O15442 326 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TULP3O75386 442 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SUPT3HO75486 399 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 GMNNO75496 209 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 EEDO75530 441 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CNTN5O94779 1100 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CDK14O94921 469 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 WDR47O94967 919 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TRIM16O95361 564 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 H6PDO95479 791 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 GLUD1P00367 558 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 OTCP00480 354 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 S100BP04271 92 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 RHOCP08134 193 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 OR4Q2P0C623 313 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF23P17027 643 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF26P17031 533 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF7P17097 686 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 GPX3P22352 226 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 RPS3P23396 243 aaKnown RBP eCLIP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 HOXD9P28356 352 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 RGS4P49798 205 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 NOVA1P51513 510 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CDKN2DP55273 166 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 POLE2P56282 527 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 AP1S1P61966 158 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ESRRGP62508 458 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ERVK-8P63133 956 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 NKX6-1P78426 367 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 MS4A2Q01362 244 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CACNG1Q06432 222 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 MTAPQ13126 283 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PRKG2Q13237 762 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 MAD2L1Q13257 205 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PLD1Q13393 1074 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 APOFQ13790 326 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 RCAN2Q14206 197 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PFKFB4Q16877 469 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 LRRC36Q1X8D7 754 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TTLL9Q3SXZ7 439 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ATP6AP1LQ52LC2 224 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CDKL4Q5MAI5 379 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 FAM182AQ5T1J6 154 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TMTC4Q5T4D3 741 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TPGS2Q68CL5 300 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 RETSATQ6NUM9 610 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PPP4R4Q6NUP7 873 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 FUT10Q6P4F1 479 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 B3GNT6Q6ZMB0 384 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZBTB49Q6ZSB9 765 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CARM1Q86X55 608 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ADGRG3Q86Y34 549 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF280BQ86YH2 543 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CHERPQ8IWX8 916 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TBC1D21Q8IYX1 336 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PGBD5Q8N414 524 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 DPP10Q8N608 796 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF557Q8N988 423 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ATAD1Q8NBU5 361 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PNPT1Q8TCS8 783 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 OSCP1Q8WVF1 389 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ANKRD49Q8WVL7 239 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 IGSF8Q969P0 613 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 ATP6V1E2Q96A05 226 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PPWD1Q96BP3 646 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PTERQ96BW5 349 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 TUBGCP3Q96CW5 907 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PHF21BQ96EK2 531 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 C1GALT1C1Q96EU7 318 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 CENPNQ96H22 339 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 DNAJC1Q96KC8 554 aaKnown RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PRICKLE1Q96MT3 831 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PGLYRP2Q96PD5 576 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 GCNAQ96QF7 691 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 SEPT5Q99719 369 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-217ENST00000567817 NPAS2Q99743 824 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 PKP2Q99959 881 aa5.11□□□□□ -1.59
CAPN3-217ENST00000567817 HEPHQ9BQS7 1158 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms