RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C17orf62Q9BQA9 187 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ACPTQ9BZG2 426 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 C20orf27Q9GZN8 174 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ILKAPQ9H0C8 392 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 KLHL31Q9H511 634 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 COPS7BQ9H9Q2 264 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 BRF2Q9HAW0 419 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ZDHHC2Q9UIJ5 367 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 HAO1Q9UJM8 370 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SLC12A4Q9UP95 1085 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 TRAF6Q9Y4K3 522 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 PTGDR2Q9Y5Y4 395 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SLC22A7Q9Y694 548 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 MAU2Q9Y6X3 613 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 NUP210LQ5VU65 1888 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 C9J4A7 227 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 MEN1O00255 615 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 FOXS1O43638 330 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 RDH16O75452 317 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 SEMA3DO95025 777 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 NSA2O95478 260 aaKnown RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 B3GALT4O96024 378 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 FGF4P08620 206 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 LIPCP11150 499 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 ITGAXP20702 1163 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 AGXTP21549 392 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 FBLP22087 321 aaKnown RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 PTX3P26022 381 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 CERS1P27544 350 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 SSR2P43308 183 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 RPL14P50914 215 aaKnown RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 ABHD18Q0P651 414 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 CUL3Q13618 768 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 PDCD2Q16342 344 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 NKAIN1Q4KMZ8 207 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 DEPDC1Q5TB30 811 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 ZNF385CQ66K41 422 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 NIPAL1Q6NVV3 410 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 PRMT9Q6P2P2 845 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 ABHD17CQ6PCB6 329 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 FAM198BQ6UWH4 519 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 TIPARPQ7Z3E1 657 aaKnown RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 PDSS2Q86YH6 399 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 DDIASQ8IXT1 998 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 DEPDC4Q8N2C3 294 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 GBP7Q8N8V2 638 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 SRFBP1Q8NEF9 429 aaKnown RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 OR9A4Q8NGU2 314 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 MMABQ96EY8 250 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 FAR2Q96K12 515 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 C7orf26Q96N11 449 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 DPH2Q9BQC3 489 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 LHX9Q9NQ69 397 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 MARCOQ9UEW3 520 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 CDC14AQ9UNH5 594 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.88□□□□□ -0.67
KARS-207ENST00000566560 NAALAD2Q9Y3Q0 740 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 DNAJC15Q9Y5T4 150 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 AKAP13Q12802 2813 aa10.88□□□□□ -0.67
KARS-207ENST00000566560 H0YIG0 161 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 SGK494L7N484 410 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 ERVH48-1M5A8F1 160 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 RTCAO00442 366 aaKnown RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 PLPP1O14494 284 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 PIP5K1BO14986 540 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 B3GALT2O43825 422 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 GALR3O60755 368 aaPredicted RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 RSL1D1O76021 490 aaKnown RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 OR1D4P47884 311 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 MTTPP55157 894 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 OLR1P78380 273 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 BTN3A2P78410 334 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 DCDP81605 110 aaKnown RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 HMGCS1Q01581 520 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 GUCY1A3Q02108 690 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 RGS9BPQ6ZS82 235 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 RNF165Q6ZSG1 346 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 FAM47EQ6ZV65 393 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 NUDT13Q86X67 352 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 CRLF3Q8IUI8 442 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 CACNA2D3Q8IZS8 1091 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 COL26A1Q96A83 441 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 RGMAQ96B86 450 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 C19orf60Q96EN9 201 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 TBCDQ9BTW9 1192 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 SORBS1Q9BX66 1292 aaKnown RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 MRPL1Q9BYD6 325 aaKnown RBP10.87□□□□□ -0.67
KARS-207ENST00000566560 ROGDIQ9GZN7 287 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 CHST8Q9H2A9 424 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 TUBB1Q9H4B7 451 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 ZNF304Q9HCX3 659 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 SLCO1B3Q9NPD5 702 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 NMRK1Q9NWW6 199 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 PSD3Q9NYI0 1048 aa10.87□□□□□ -0.67
KARS-207ENST00000566560 HCN3Q9P1Z3 774 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms