RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 DNAJC14Q6Y2X3 702 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 TMEM26Q6ZUK4 368 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 CAMKMTQ7Z624 323 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 AMIGO2Q86SJ2 522 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 CALHM3Q86XJ0 350 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 TMEM132CQ8N3T6 1108 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 EID2Q8N6I1 236 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 C1orf52Q8N6N3 182 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 OR52E4Q8NGH9 312 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 OR52E1Q8NGJ3 308 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 LCN9Q8WX39 176 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 UBE2E3Q969T4 207 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 NSMCE2Q96MF7 247 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 IL17FQ96PD4 163 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 DMRT3Q9NQL9 472 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 ANAPC2Q9UJX6 822 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 MAPRE3Q9UPY8 281 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 A6NHS1 94 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 CDX4O14627 284 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 SIGLEC6O43699 453 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 LYNP07948 512 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 GLB1P16278 677 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 FASP25445 335 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 PKLRP30613 574 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 TIA1P31483 386 aaKnown RBP eCLIP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 GZMMP51124 257 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 EPHA4P54764 986 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 WNT3P56703 355 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 NHLH1Q02575 133 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 GPR18Q14330 331 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 OR4F3Q6IEY1 312 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 KLHL35Q6PF15 583 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 SLC35F3Q8IY50 421 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 MARVELD2Q8N4S9 558 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 OR7A2PQ8NGA2 310 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 NAT6Q93015 286 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 GFM2Q969S9 779 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 GBP5Q96PP8 586 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 SLC38A3Q99624 504 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 INPP5KQ9BT40 448 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 REXO4Q9GZR2 422 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 SRMSQ9H3Y6 488 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 EPB41L1Q9H4G0 881 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 Q9H521 79 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 YY1AP1Q9H869 796 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 PARD6AQ9NPB6 346 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 FAM120CQ9NX05 1096 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 OR6C2Q9NZP2 312 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 PADI4Q9UM07 663 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 PLAGL1Q9UM63 463 aa12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 COL5A1P20908 1838 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-208ENST00000565070 GOLGA4Q13439 2230 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 FAM220BPB1ANY3 271 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 SCAMP2O15127 329 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 B3GALT4O96024 378 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 ANXA4P09525 319 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 PNLIPP16233 465 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 CDKN2CP42773 168 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 GPR3P46089 330 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 POLE2P56282 527 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 INTS11Q5TA45 600 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 THEMIS2Q5TEJ8 643 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 TMEM154Q6P9G4 183 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 ZNF438Q7Z4V0 828 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 ANKRD46Q86W74 232 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 AMIGO1Q86WK6 493 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■■■■ 26.8
NSMCE1-208ENST00000565070 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 PCBD2Q9H0N5 130 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 SPNS1Q9H2V7 528 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 WDFY4Q6ZS81 3184 aa12.09□□□□□ -0.47
NSMCE1-208ENST00000565070 PRAMEF33A0A0G2JMD5 474 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 RFXANKO14593 260 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 CDH1P12830 882 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 COX7A2P14406 83 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 SOX11P35716 441 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 MAP7Q14244 749 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 PDK3Q15120 406 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 SF1Q15637 639 aaKnown RBP12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 PPP4R4Q6NUP7 873 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 TMIGD1Q6UXZ0 262 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 SFTPA2Q8IWL1 248 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 GALNT4Q8N4A0 578 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 PACRGLQ8N7B6 248 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 SMPDL3AQ92484 453 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 SLC22A18Q96BI1 424 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 SLC29A1Q99808 456 aa12.08□□□□□ -0.48
NSMCE1-208ENST00000565070 CIB1Q99828 191 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms