RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RHAGQ02094 409 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 SRSF11Q05519 484 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 ZNF33BQ06732 778 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 HYAL2Q12891 473 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 FAM83EQ2M2I3 478 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 ABHD17BQ5VST6 288 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 PAPD4Q6PIY7 484 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 IGFL2Q6UWQ7 119 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 TMIGD1Q6UXZ0 262 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 TIFABQ6ZNK6 161 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 KLHDC8AQ8IYD2 350 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 CNPY4Q8N129 248 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 KRT78Q8N1N4 520 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 RHEBL1Q8TAI7 183 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 STAG3L4Q8TBR4 150 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 CREB3L4Q8TEY5 395 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 MTBPQ96DY7 904 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 FAR2Q96K12 515 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 IMMP1LQ96LU5 166 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 GPR78Q96P69 363 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 LMF1Q96S06 567 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 ATOH8Q96SQ7 321 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 CCDC77Q9BR77 488 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 SLC6A16Q9GZN6 736 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 AICDAQ9GZX7 198 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 KCNK13Q9HB14 408 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 LANCL2Q9NS86 450 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 RAB21Q9UL25 225 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 ASB1Q9Y576 335 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 SPENQ96T58 3664 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 ZGRF1Q86YA3 2104 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 ANKDD1BA6NHY2 528 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PCDH17O14917 1159 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 ERI3O43414 337 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PRAMEF4O60810 478 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 KERAO60938 352 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 WDPCPO95876 746 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 SHBGP04278 402 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 TUBBP07437 444 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 SERPINA6P08185 405 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 COL6A2P12110 1019 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 ICAM2P13598 275 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 MAOAP21397 527 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 JAK1P23458 1154 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 SOX11P35716 441 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 GGT5P36269 586 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PLA2G16P53816 162 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 DOC2AQ14183 400 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 ELOAQ14241 798 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 ACAP2Q15057 778 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 TLR1Q15399 786 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PDK4Q16654 411 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PRAMEF9Q5VWM5 478 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 RIPOR1Q6ZS17 1223 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PLD6Q8N2A8 252 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PDPRQ8NCN5 879 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 GRHL3Q8TE85 626 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 LPAR4Q99677 370 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 VPS11Q9H270 941 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PPCSQ9HAB8 311 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 AGPAT4Q9NRZ5 378 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 NUDT4Q9NZJ9 180 aa12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 PSMC3IPQ9P2W1 217 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-204ENST00000565023 IQANK1A0A1B0GTG1 560 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 A0A1W2PQ72 361 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 ANKUB1A6NFN9 424 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 MAGEB17A8MXT2 336 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 PRMT3O60678 531 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 SEMA7AO75326 666 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 SMIM10L1P0DMW3 83 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 PCNAP12004 261 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 RNH1P13489 461 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 HNRNPH1P31943 449 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 STXBP1P61764 594 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 IRF8Q02556 426 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 CHIT1Q13231 466 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 RASA2Q15283 850 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 TDRPQ86YL5 185 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 CA13Q8N1Q1 262 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 PLPP5Q8NEB5 264 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 MZB1Q8WU39 189 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 SMIM10Q96HG1 83 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 OR1F2PQ96R84 312 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 CAPS2Q9BXY5 557 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 CD244Q9BZW8 370 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 ANKRD10Q9NXR5 420 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 STMN3Q9NZ72 180 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 GPRC5BQ9NZH0 403 aa12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 PTBP2Q9UKA9 531 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 USP9YO00507 2555 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-204ENST00000565023 MYOCOSA0A1B0GUC4 107 aa12.8□□□□□ -0.36
VPS9D1-204ENST00000565023 CBX6O95503 412 aa12.8□□□□□ -0.36
VPS9D1-204ENST00000565023 NUDT17P0C025 328 aa12.8□□□□□ -0.36
VPS9D1-204ENST00000565023 MTHFD2P13995 350 aa12.8□□□□□ -0.36
VPS9D1-204ENST00000565023 GFAPP14136 432 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms