RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 VMP1Q96GC9 406 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 RAB3IPQ96QF0 476 aaPredicted RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 SRSF8Q9BRL6 282 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 FUT8Q9BYC5 575 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 PARD6BQ9BYG5 372 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 RTN4RQ9BZR6 473 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 DEFB129Q9H1M3 183 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 TNMDQ9H2S6 317 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 CHCHD3Q9NX63 227 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 PTRH2Q9Y3E5 179 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 COL4A5P29400 1685 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 DUOX1Q9NRD9 1551 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 CEP290O15078 2479 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 TTC41PQ6P2S7 1318 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 MROH5Q6ZUA9 1318 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 TRBC2A0A5B9 178 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 EPM2AB3EWF7 344 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 H0Y626 953 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 H3BQF6 201 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CCDC188H7C350 402 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 ZSCAN12O43309 604 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 FYNP06241 537 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 DNAH10OSP0CZ25 163 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 MUTP22033 750 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CCNHP51946 323 aaPredicted RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 CCZ1BP86790 482 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CCZ1P86791 482 aaPredicted RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 GCKRQ14397 625 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CDC37Q16543 378 aaPredicted RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 FKBP1CQ5VVH2 108 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CST9LP1Q5W188 147 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 Q6ZR54 194 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 PLPPR4Q7Z2D5 763 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 COMMD2Q86X83 199 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 MAML2Q8IZL2 1156 aaPredicted RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 GUF1Q8N442 669 aaKnown RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 CEP112Q8N8E3 955 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CNNM3Q8NE01 707 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 APPL2Q8NEU8 664 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 ZNF519Q8TB69 540 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CCDC107Q8WV48 283 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 TEKT1Q969V4 418 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 FAM162AQ96A26 154 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 C16orf70Q9BSU1 422 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CRACR2AQ9BSW2 395 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 LMF2Q9BU23 707 aaKnown RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 NUP85Q9BW27 656 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 KLHL4Q9C0H6 718 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 CD209Q9NNX6 404 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 PPANQ9NQ55 473 aaKnown RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 BATF3Q9NR55 127 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 HOMER3Q9NSC5 361 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 DDX19AQ9NUU7 478 aaKnown RBP3.54□□□□□ -1.84
CHD9-212ENST00000564641 ARHGEF38Q9NXL2 777 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 GDE1Q9NZC3 331 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 RHCGQ9UBD6 479 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 IL17BQ9UHF5 180 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 SMC3Q9UQE7 1217 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 SCN9AQ15858 1988 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 AK9Q5TCS8 1911 aa3.54□□□□□ -1.84
CHD9-212ENST00000564641 GPR75-ASB3A0A0A6YYF3 556 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 HYKKA2RU49 373 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 ANKRD61A6NGH8 418 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 STX6O43752 255 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 IDH3BO43837 385 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 MAGEC1O60732 1142 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 RTN2O75298 545 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 RECQL5O94762 991 aaPredicted RBP3.53□□□□□ -1.84
CHD9-212ENST00000564641 GGPS1O95749 300 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 BAG2O95816 211 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 VPREB1P12018 145 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 RBMS1P29558 406 aaKnown RBP3.53□□□□□ -1.84
CHD9-212ENST00000564641 MAGEA8P43361 318 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 ARSEP51690 589 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 MAZP56270 477 aaKnown RBP3.53□□□□□ -1.84
CHD9-212ENST00000564641 TMEM50BP56557 158 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 B3GALT5-AS1P59052 145 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 COG2Q14746 738 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 CAMK4Q16566 473 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 FILIP1LQ4L180 1135 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 KRBOX4Q5JUW0 171 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 ERO1BQ86YB8 467 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 OR8H3Q8N146 312 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 FBXL16Q8N461 479 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 OR13J1Q8NGT2 312 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 RAET1EQ8TD07 263 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 IRGQQ8WZA9 623 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 ATP6V1E2Q96A05 226 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 VPS33AQ96AX1 596 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 NEK1Q96PY6 1258 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 GAL3ST4Q96RP7 486 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 PAFAH2Q99487 392 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 PARK7Q99497 189 aaKnown RBP3.53□□□□□ -1.84
CHD9-212ENST00000564641 SLC25A23Q9BV35 468 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 NAT10Q9H0A0 1025 aaKnown RBP3.53□□□□□ -1.84
CHD9-212ENST00000564641 C2orf40Q9H1Z8 148 aa3.53□□□□□ -1.84
CHD9-212ENST00000564641 MMP27Q9H306 513 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms