RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 BTBD16Q32M84 506 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 LIPJQ5W064 366 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 JMJD6Q6NYC1 403 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 METTL2BQ6P1Q9 378 aaKnown RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 ISLR2Q6UXK2 745 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 CYP4X1Q8N118 509 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PTGR2Q8N8N7 351 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PNPLA2Q96AD5 504 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 MS4A6EQ96DS6 147 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 SMIM10Q96HG1 83 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 MAGEB10Q96LZ2 347 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 LPAR4Q99677 370 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 MRPL46Q9H2W6 279 aaKnown RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 IPPKQ9H8X2 491 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF358Q9NW07 568 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PTGFRNQ9P2B2 879 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 FETUBQ9UGM5 382 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 TEKT2Q9UIF3 430 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF490Q9ULM2 529 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 MRPS33Q9Y291 106 aaKnown RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 ASB1Q9Y576 335 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PCDHGA11Q9Y5H2 935 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 SPACA6W5XKT8 324 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 NUP210LQ5VU65 1888 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 TLN1Q9Y490 2541 aaKnown RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 IGHV3-20A0A0C4DH32 117 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 DYTNA2CJ06 578 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 OR2W5A6NFC9 320 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 MAGEB17A8MXT2 336 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 KLK8O60259 260 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 SEC24DO94855 1032 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-206ENST00000564557 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
CNOT1-206ENST00000564557 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
CNOT1-206ENST00000564557 CCNG1P51959 295 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 RAP1GDS1P52306 607 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 MTTPP55157 894 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 PCOLCEQ15113 449 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 EXT1Q16394 746 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 CRB2Q5IJ48 1285 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 IGFL3Q6UXB1 125 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 LANCL3Q6ZV70 420 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 ANKRD37Q7Z713 158 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 CA13Q8N1Q1 262 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 RBMXL3Q8N7X1 1067 aaKnown RBP12.87□□□□□ -0.35
CNOT1-206ENST00000564557 DNAJB14Q8TBM8 379 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 CPT1CQ8TCG5 803 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 BRIX1Q8TDN6 353 aaKnown RBP12.87□□□□□ -0.35
CNOT1-206ENST00000564557 ADAMTS18Q8TE60 1221 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 CMTM7Q96FZ5 175 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 CNDP1Q96KN2 507 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 KCNC2Q96PR1 638 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 F2RL3Q96RI0 385 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 LMF1Q96S06 567 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 MESP1Q9BRJ9 268 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 LUZP4Q9P127 313 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
CNOT1-206ENST00000564557 A0A1W2PQ72 361 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 A8MUI8 341 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 STX16-NPEPL1H3BU86 382 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 STX16O14662 325 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 UGDHO60701 494 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PRAMEF4O60810 478 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 SH3BGRLO75368 114 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 SIX3O95343 332 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 CLDN9O95484 217 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 TGFB1P01137 390 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 KRT15P19012 456 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 EPORP19235 508 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 CD22P20273 847 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 TNFRSF8P28908 595 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 ARG2P78540 354 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 RHAGQ02094 409 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PCDH1Q08174 1060 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 Q0VFX4 171 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 CPSF6Q16630 551 aaKnown RBP eCLIP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 TMEM35AQ53FP2 167 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 ABHD17BQ5VST6 288 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PRAMEF9Q5VWM5 478 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 SLC6A19Q695T7 634 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 TTC19Q6DKK2 380 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 ABHD17CQ6PCB6 329 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PAPD4Q6PIY7 484 aaKnown RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 QSOX2Q6ZRP7 698 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 GOLGA7Q7Z5G4 137 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 LCA5Q86VQ0 697 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 IQCKQ8N0W5 287 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 SIRT6Q8N6T7 355 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms