RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 MAOAP21397 527 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 TPP2P29144 1249 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 GDF5P43026 501 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 SRSF11Q05519 484 aaKnown RBP16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 C18orf21Q32NC0 220 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 ZNF468Q5VIY5 522 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 ZNF227Q86WZ6 799 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 KRT78Q8N1N4 520 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 KIF2BQ8N4N8 673 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 ZNF808Q8N4W9 903 aaPredicted RBP16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 APCDD1LQ8NCL9 501 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 ARMC2Q8NEN0 867 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 CDKL2Q92772 493 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 MS4A6EQ96DS6 147 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 WDR34Q96EX3 536 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 QRFPRQ96P65 431 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 GPR22Q99680 433 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 CPNE1Q99829 537 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 PHACTR1Q9C0D0 580 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 KLHL1Q9NR64 748 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 CLDN16Q9Y5I7 305 aa16.11■□□□□ 0.17
VPS9D1-203ENST00000563798 SYNDIG1LA6NDD5 238 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 FAM159BA6NKW6 160 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 CXorf49A8MYA2 514 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 NME2P1O60361 137 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 GSTA2P09210 222 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 AGAP20933 346 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 NME2P22392 152 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 SSTR1P30872 391 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 HNRNPH1P31943 449 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 HPDP32754 393 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 CYB561P49447 251 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 HLCSP50747 726 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 SLC12A2P55011 1212 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 HSD17B7P56937 341 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 ATP6V0D1P61421 351 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 ALDH6A1Q02252 535 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 OC90Q02509 493 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 RUNX2Q13950 521 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 E2F2Q14209 437 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 SLBPQ14493 270 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 ZKSCAN8Q15776 578 aaPredicted RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 SULT1C3Q6IMI6 304 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 GALNTL5Q7Z4T8 443 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 MAATS1Q7Z4T9 603 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 FAM98AQ8NCA5 519 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 B3GNT7Q8NFL0 401 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 ADAMTS18Q8TE60 1221 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 FAR2Q96K12 515 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 UBXN10Q96LJ8 280 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 RBBP8Q99708 897 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 TMEM79Q9BSE2 394 aa16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 CNOT10Q9H9A5 744 aaKnown RBP16.1■□□□□ 0.17
VPS9D1-203ENST00000563798 LRBAP50851 2863 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 A0A088AWK7 358 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 TCRBV9S1A1TA0A576 114 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 PRSS44E7EML9 344 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 PRAMEF4O60810 478 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 SLC25A12O75746 678 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 CD1DP15813 335 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 ZNF10P21506 573 aaPredicted RBP16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 GPR143P51810 404 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 CASP6P55212 293 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 RAB38P57729 211 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 BTN3A2P78410 334 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 CALCOCO2Q13137 446 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 PRAMEF9Q5VWM5 478 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 XKRXQ6PP77 449 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 BNC2Q6ZN30 1099 aaPredicted RBP16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 VN1R5Q7Z5H4 357 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 GPSM1Q86YR5 675 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 SPPL2CQ8IUH8 684 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 CYP4X1Q8N118 509 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 PDPRQ8NCN5 879 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 SPATA4Q8NEY3 305 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 OR2L5Q8NG80 312 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 MARVELD3Q96A59 401 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 RHBGQ9H310 441 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 DNAJC11Q9NVH1 559 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 GRHL1Q9NZI5 618 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 PYCARDQ9ULZ3 195 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 MYO7BQ6PIF6 2116 aa16.09■□□□□ 0.17
VPS9D1-203ENST00000563798 ERI3O43414 337 aaKnown RBP16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 ASNA1O43681 348 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 STK16O75716 305 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 PIAS1O75925 651 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 CCDC166P0CW27 439 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 STMN1P16949 149 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 GP5P40197 560 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 CLCN2P51788 898 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 C3AR1Q16581 482 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 ZNF630Q2M218 657 aaPredicted RBP16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 ABHD17CQ6PCB6 329 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 ZNF595Q8IYB9 648 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 POGLUT1Q8NBL1 392 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 KIAA1191Q96A73 305 aa16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 PTCD3Q96EY7 689 aaKnown RBP16.08■□□□□ 0.16
VPS9D1-203ENST00000563798 EFCAB11Q9BUY7 163 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms