RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR2T11Q8NH01 316 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 DYRK2Q92630 601 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 HAS2Q92819 552 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 ULK4Q96C45 1275 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CFAP36Q96G28 342 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 C16orf58Q96GQ5 468 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 C16orf45Q96MC5 204 aaPredicted RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 NSMCE2Q96MF7 247 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 NAP1L3Q99457 506 aaPredicted RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 PKP2Q99959 881 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 FAM213AQ9BRX8 229 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 MTMR12Q9C0I1 747 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 DPH5Q9H2P9 285 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 C10orf88Q9H8K7 445 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 C3orf14Q9HBI5 128 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 KCNMB3Q9NPA1 279 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 NGBQ9NPG2 151 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 GPR173Q9NS66 373 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SOHLH2Q9NX45 425 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CLIP2Q9UDT6 1046 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 C19orf25Q9UFG5 118 aaPredicted RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 UBQLN2Q9UHD9 624 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SH3BGRL2Q9UJC5 107 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 GRID1Q9ULK0 1009 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 TMCC3Q9ULS5 477 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 PLA2G4CQ9UP65 541 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 PLCL2Q9UPR0 1127 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 EXOC7Q9UPT5 735 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 AURKCQ9UQB9 309 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 PPP2R2CQ9Y2T4 447 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 PFASO15067 1338 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 STK36Q9NRP7 1315 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM129A0AVI4 362 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 GLTPD2A6NH11 291 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 MSGN1A6NI15 193 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF732B4DXR9 585 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 HHLA1C9JL84 531 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 K7EPI3 171 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 EPHB6O15197 1021 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 KHDRBS3O75525 346 aaKnown RBP2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 TRMUO75648 421 aaKnown RBP2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PDGFBP01127 241 aaPredicted RBP2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 MT-ND2P03891 347 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 ZCCHC18P0CG32 403 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 CEACAM1P13688 526 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PRDX6P30041 224 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 KIF5BP33176 963 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 MAGEA11P43364 429 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 SP3Q02447 781 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 GIT2Q14161 759 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 TTC31Q49AM3 519 aaPredicted RBP2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 CMPK2Q5EBM0 449 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 LCN1P1Q5VSP4 162 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 LYPLAL1Q5VWZ2 237 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 UGT3A1Q6NUS8 523 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 ARHGAP11AQ6P4F7 1023 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PSRC1Q6PGN9 363 aaPredicted RBP2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 DHRS11Q6UWP2 260 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 B3GLCTQ6Y288 498 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PRUNE1Q86TP1 453 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 ELMOD2Q8IZ81 293 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 KIRREL3Q8IZU9 778 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 KDM8Q8N371 416 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 TRPV3Q8NET8 790 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 SPATA18Q8TC71 538 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 UBTD2Q8WUN7 234 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 ESAMQ96AP7 390 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 BPIFA2Q96DR5 249 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 LRR1Q96L50 414 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 SAMD8Q96LT4 415 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 NECTIN4Q96NY8 510 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 HSD3B7Q9H2F3 369 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 UBQLN3Q9H347 655 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 DPEP3Q9H4B8 488 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 MAGEF1Q9HAY2 307 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PPANQ9NQ55 473 aaKnown RBP2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PIGVQ9NUD9 493 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 PANK4Q9NVE7 773 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 RNF186Q9NXI6 227 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 FAM153AQ9UHL3 310 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 BLOC1S6Q9UL45 172 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 ETV7Q9Y603 341 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 AP1M2Q9Y6Q5 423 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 NPHP3Q7Z494 1330 aa2.86□□□□□ -1.95
SHCBP1-202ENST00000563219 IGHV4-4A0A075B6R2 117 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TRBV2A0A0J9YWF9 115 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TRBV5-5A0A0J9YX44 114 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 A0A0U1RRA0 63 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 MTMR11A4FU01 709 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 FAM149AA5PLN7 773 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 A8MVM7 634 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 C2CD4DB7Z1M9 353 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 M0R296 226 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC28A1O00337 649 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF195O14628 629 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TEX28O15482 410 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 SCO2O43819 266 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 EXTL3O43909 919 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms