RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 DPH1Q9BZG8 443 aa12.09□□□□□ -0.47
CDH11-204ENST00000562712 ROGDIQ9GZN7 287 aa12.09□□□□□ -0.47
CDH11-204ENST00000562712 PRM3Q9NNZ6 103 aa12.09□□□□□ -0.47
CDH11-204ENST00000562712 AHSPQ9NZD4 102 aa12.09□□□□□ -0.47
CDH11-204ENST00000562712 RALYQ9UKM9 306 aaKnown RBP12.09□□□□□ -0.47
CDH11-204ENST00000562712 SPTBP11277 2137 aa12.08□□□□□ -0.47
CDH11-204ENST00000562712 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 C21orf140B9A014 251 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 SGK494L7N484 410 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 SLC28A1O00337 649 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 PLPP1O14494 284 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 TLX3O43711 291 aaPredicted RBP12.08□□□□□ -0.48
CDH11-204ENST00000562712 KLHL18O94889 574 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 ETHE1O95571 254 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 RAB40ALP0C0E4 278 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 IL1RNP18510 177 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 TCN2P20062 427 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 OR1D4P47884 311 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 BTN3A2P78410 334 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 OCRLQ01968 901 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 AP5B1Q2VPB7 878 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 LCN10Q6JVE6 187 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 FAM199XQ6PEV8 388 aaPredicted RBP12.08□□□□□ -0.48
CDH11-204ENST00000562712 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 DTWD1Q8N5C7 304 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 IL22RA1Q8N6P7 574 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 ZNF781Q8N8C0 355 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 AMER3Q8N944 861 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 FKBP10Q96AY3 582 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 RNF31Q96EP0 1072 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 METTL2AQ96IZ6 378 aaKnown RBP12.08□□□□□ -0.48
CDH11-204ENST00000562712 QRFPRQ96P65 431 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 SERINC2Q96SA4 455 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 CHST8Q9H2A9 424 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 SLC26A1Q9H2B4 701 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 PFDN4Q9NQP4 134 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 SLC22A11Q9NSA0 550 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 IFT80Q9P2H3 777 aaPredicted RBP12.08□□□□□ -0.48
CDH11-204ENST00000562712 SLC12A4Q9UP95 1085 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 MAP4K5Q9Y4K4 846 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 MAU2Q9Y6X3 613 aa12.08□□□□□ -0.48
CDH11-204ENST00000562712 TMEM233B4DJY2 109 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 C4orf51C9J302 202 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 NPIPB8E9PQR5 432 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 SAP18O00422 153 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 SH3BGRLO75368 114 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 SCELO95171 688 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 FBLP22087 321 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 IL10P22301 178 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 ATP5A1P25705 553 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 EIF2S3P41091 472 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 HTR6P50406 440 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 RAP1GDS1P52306 607 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 MTTPP55157 894 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 TBL3Q12788 808 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 CLN3Q13286 438 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 TGIF1Q15583 401 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 FAM219BQ5XKK7 198 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 MRPL14Q6P1L8 145 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 COX15Q7KZN9 410 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 METTL4Q8N3J2 472 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 METTL27Q8N6F8 245 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 OR51Q1Q8NH59 317 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 FAM76AQ8TAV0 307 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 AGR3Q8TD06 166 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 CHTF18Q8WVB6 975 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 TWIST2Q8WVJ9 160 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 HBEGFQ99075 208 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 EFHD1Q9BUP0 239 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 ZNF717Q9BY31 904 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 ACPTQ9BZG2 426 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 TGIF2Q9GZN2 237 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 TUBB1Q9H4B7 451 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 DDX31Q9H8H2 851 aaKnown RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 WDR54Q9H977 334 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 MKKSQ9NPJ1 570 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 ZNF282Q9UDV7 671 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 GPN3Q9UHW5 284 aaPredicted RBP12.07□□□□□ -0.48
CDH11-204ENST00000562712 KCND3Q9UK17 655 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 ADAM29Q9UKF5 820 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 FIS1Q9Y3D6 152 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 CCL27Q9Y4X3 112 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 PCDHGA6Q9Y5G7 932 aa12.07□□□□□ -0.48
CDH11-204ENST00000562712 IGLV3-12A0A075B6K2 115 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 A0A087WV48 116 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 LOC101059948A0A1B0GTJ6 334 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 VSTM2BA6NLU5 285 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 C9J4A7 227 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 SLCO1B7G3V0H7 640 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 RGS14O43566 566 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 B3GALT2O43825 422 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 RSL1D1O76021 490 aaKnown RBP12.06□□□□□ -0.48
CDH11-204ENST00000562712 B3GALT4O96024 378 aa12.06□□□□□ -0.48
CDH11-204ENST00000562712 LINC00032P0C843 101 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms