RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TMEM63AO94886 807 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ITGA5P08648 1049 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ABHD2P08910 425 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 RALAP11233 206 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 CD58P19256 250 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 PSMA2P25787 234 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 GALNSP34059 522 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 PHBP35232 272 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 NNMTP40261 264 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 MDH1P40925 334 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 RPL21P46778 160 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 NR2C2P49116 596 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 STK19P49842 368 aaPredicted RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 RENBPP51606 427 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SGSHP51688 502 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SLC18A1P54219 525 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 RAD23BP54727 409 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 AIF1P55008 147 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 AP2B1P63010 937 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 COG7P83436 770 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ECT2LQ008S8 904 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 MYBPHQ13203 477 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TRA2AQ13595 282 aaKnown RBP eCLIP3.09□□□□□ -1.91
SPG11-225ENST00000561391 ELAVL3Q14576 367 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 RASA2Q15283 850 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TAF5Q15542 800 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TAZQ16635 292 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZSCAN26Q16670 478 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 EFHC1Q5JVL4 640 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 CEP85LQ5SZL2 805 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 LGSNQ5TDP6 509 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ARHGAP17Q68EM7 881 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 MSANTD2Q6P1R3 559 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 NEK5Q6P3R8 708 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 MTFR2Q6P444 385 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 FAM199XQ6PEV8 388 aaPredicted RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 ENPP7Q6UWV6 458 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 GFRALQ6UXV0 394 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 CENPUQ71F23 418 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TAF8Q7Z7C8 310 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TMEM110Q86TL2 294 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 RIBC1Q8N443 379 aaPredicted RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 CARNMT1Q8N4J0 409 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZADH2Q8N4Q0 377 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.09□□□□□ -1.91
SPG11-225ENST00000561391 DNAAF3Q8N9W5 541 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ANKRD52Q8NB46 1076 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SLC4A11Q8NBS3 891 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 KCTD6Q8NC69 237 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 OR4D9Q8NGE8 314 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 CT55Q8WUE5 264 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 UBLCP1Q8WVY7 318 aaPredicted RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 TEKT4Q8WW24 435 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 OR8D1Q8WZ84 308 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 KRT35Q92764 455 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 AZIN2Q96A70 460 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 FAM131CQ96AQ9 280 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 C3orf49Q96BT1 292 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 STAMBPL1Q96FJ0 436 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 HSFY1Q96LI6 401 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZIM3Q96PE6 472 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TIMP4Q99727 224 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 DDX50Q9BQ39 737 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZPBPQ9BS86 351 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 HERPUD2Q9BSE4 406 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 FAM167BQ9BTA0 163 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 POLDIP3Q9BY77 421 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 TXLNGYQ9BZA5 131 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ELOVL4Q9GZR5 314 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 DPH5Q9H2P9 285 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SNX25Q9H3E2 840 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 GOLPH3Q9H4A6 298 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 DPEP2Q9H4A9 486 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ACTL8Q9H568 366 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 CCDC134Q9H6E4 229 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 TMBIM4Q9HC24 238 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZBTB20Q9HC78 741 aaPredicted RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 SEPSECSQ9HD40 501 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 ACP6Q9NPH0 428 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 FBXO8Q9NRD0 319 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZDHHC18Q9NUE0 388 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.09□□□□□ -1.91
SPG11-225ENST00000561391 COMMD8Q9NX08 183 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 GDAP2Q9NXN4 497 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SMARCAL1Q9NZC9 954 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SENP1Q9P0U3 644 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 C5AR2Q9P296 337 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 FETUBQ9UGM5 382 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 INTS6Q9UL03 887 aaKnown RBP3.09□□□□□ -1.91
SPG11-225ENST00000561391 PADI1Q9ULC6 663 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 ZNF148Q9UQR1 794 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 SNX24Q9Y343 169 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 PCDHGB3Q9Y5G1 929 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 CSAG2Q9Y5P2 127 aa3.09□□□□□ -1.91
SPG11-225ENST00000561391 CHD3Q12873 2000 aaKnown RBP3.09□□□□□ -1.92
SPG11-225ENST00000561391 RYR3Q15413 4870 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 A0A087WUV0 522 aaPredicted RBP3.08□□□□□ -1.92
SPG11-225ENST00000561391 A0A0U1RQS6 177 aa3.08□□□□□ -1.92
SPG11-225ENST00000561391 TCRBV5S1A1TA0A578 114 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms