RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 TMEM64Q6YI46 380 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 C17orf107Q6ZR85 190 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 BTN2A1Q7KYR7 527 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ASPGQ86U10 573 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ZNF410Q86VK4 478 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 LAX1Q8IWV1 398 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 SLC43A2Q8N370 569 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ICA1LQ8NDH6 482 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 OLIG1Q8TAK6 271 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 U2AF1L4Q8WU68 220 aaKnown RBP3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 GATAD1Q8WUU5 269 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 DNASE2BQ8WZ79 361 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 HAS2Q92819 552 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 BPIFA2Q96DR5 249 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ZNF560Q96MR9 790 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 NEDD4LQ96PU5 975 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 PRAM1Q96QH2 718 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 KRT12Q99456 494 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 TSPYL1Q9H0U9 437 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 C5orf66Q9H5L9 145 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 MED20Q9H944 212 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ZNF71Q9NQZ8 489 aaPredicted RBP3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 PRMT8Q9NR22 394 aaPredicted RBP3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 SPHK2Q9NRA0 654 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 HOMER3Q9NSC5 361 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ANO10Q9NW15 660 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 NLGN3Q9NZ94 848 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 UBQLN2Q9UHD9 624 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 FOXA2Q9Y261 457 aaPredicted RBP3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 ETV7Q9Y603 341 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 CSNK1G3Q9Y6M4 447 aa3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 SPAG9O60271 1321 aaKnown RBP3.07□□□□□ -1.92
CTDSPL2-211ENST00000561189 SLC15A5A6NIM6 579 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 INPP4BO15327 924 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 MAGEB2O15479 319 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 PSMD3O43242 534 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 EDIL3O43854 480 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 OLFM2O95897 454 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 CD48P09326 243 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 SKILP12757 684 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 GNB3P16520 340 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 ARF4P18085 180 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 TYMPP19971 482 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 C4BPBP20851 252 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 IL10P22301 178 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 PRKACGP22612 351 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 PPP2R1AP30153 589 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 DUTP33316 252 aaKnown RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 FEN1P39748 380 aaKnown RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 NUMBP49757 651 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 CLCN4P51793 760 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 SSTP61278 116 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 CDKL1Q00532 357 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 SRSF9Q13242 221 aaKnown RBP eCLIP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 OTUD3Q5T2D3 398 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 C1orf189Q5VU69 101 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 FAM53AQ6NSI3 398 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 SERPINA12Q8IW75 414 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 ZNF843Q8N446 348 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 CLEC1AQ8NC01 280 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 CCDC197Q8NCU1 140 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 NUP37Q8NFH4 326 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 OR2T6Q8NHC8 308 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 TMEM190Q8WZ59 177 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 ZNF486Q96H40 463 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 RUNDC3BQ96NL0 473 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 TRPV6Q9H1D0 765 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 TMEM245Q9H330 911 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 SDF2L1Q9HCN8 221 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 FGF22Q9HCT0 170 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 MED17Q9NVC6 651 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 DNAJC11Q9NVH1 559 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 ERVK-18Q9QC07 812 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 KLK11Q9UBX7 282 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 APPL1Q9UKG1 709 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 CCPG1Q9ULG6 757 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 HEG1Q9ULI3 1381 aa3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 STRAPQ9Y3F4 350 aaKnown RBP3.06□□□□□ -1.92
CTDSPL2-211ENST00000561189 UMODL1Q5DID0 1318 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 RPGRIP1LQ68CZ1 1315 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 IGLV7-46A0A075B6I9 117 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 KRT87PA6NCN2 255 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 MSGN1A6NI15 193 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 KPNA7A9QM74 516 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 ZNF732B4DXR9 585 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 SLC28A1O00337 649 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 CHEK1O14757 476 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 TFECO14948 347 aaPredicted RBP3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 KHDRBS3O75525 346 aaKnown RBP3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 OR6A2O95222 327 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 NADKO95544 446 aaPredicted RBP3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 SERPINF2P08697 491 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 ABHD2P08910 425 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 MMP10P09238 476 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 PATE4P0C8F1 98 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 PCP11498 1178 aaKnown RBP3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 UGT1A6P19224 532 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 MAPK3P27361 379 aaPredicted RBP3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 PKLRP30613 574 aa3.05□□□□□ -1.92
CTDSPL2-211ENST00000561189 SOX3P41225 446 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms