RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 YRDCQ86U90 279 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 TRIM74Q86UV6 250 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TRIM73Q86UV7 250 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SATL1Q86VE3 508 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 GPBP1Q86WP2 473 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CHSY1Q86X52 802 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ADGRG3Q86Y34 549 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NUDCD3Q8IVD9 361 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ADHFE1Q8IWW8 467 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ZNF683Q8IZ20 524 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MYOCDQ8IZQ8 938 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 APCDD1Q8J025 514 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RBFAQ8N0V3 343 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ELMOD1Q8N336 334 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LNX2Q8N448 690 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TTC9BQ8N6N2 239 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LINC01465Q8N7H1 131 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PNLDC1Q8NA58 520 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 SYT14Q8NB59 555 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TP53I13Q8NBR0 393 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 MINDY2Q8NBR6 621 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 STXBP6Q8NFX7 210 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TRIM58Q8NG06 486 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 OR4C15Q8NGM1 316 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 OR6M1Q8NGM8 313 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 OSR1Q8TAX0 266 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 ARRDC2Q8TBH0 407 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RAB3IL1Q8TBN0 382 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RAET1EQ8TD07 263 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CCDC12Q8WUD4 166 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 TSEN15Q8WW01 171 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 ASB5Q8WWX0 329 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SMPDL3BQ92485 455 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 FAM168AQ92567 244 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LARP4BQ92615 738 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 RFKQ969G6 155 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TAAR8Q969N4 342 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NT5C3BQ969T7 300 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RAB39BQ96DA2 213 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MTBPQ96DY7 904 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 GRAMD2BQ96HH9 432 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NSL1Q96IY1 281 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 FAM71F1Q96KD3 344 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 C4orf36Q96KX1 117 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 Q96MF0 132 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 VSTM2LQ96N03 204 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ZNF583Q96ND8 569 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LRFN5Q96NI6 719 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 AMDHD1Q96NU7 426 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 AGAP3Q96P47 875 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PLEKHG4BQ96PX9 1271 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ACCSQ96QU6 501 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PANX2Q96RD6 677 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MTERF1Q99551 399 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 OMDQ99983 421 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CBWD1Q9BRT8 395 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TTYH2Q9BSA4 534 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ALKBH7Q9BT30 221 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 NTMT1Q9BV86 223 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SPATA16Q9BXB7 569 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 C1QTNF7Q9BXJ2 289 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 ERVK-6Q9BXR3 956 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NDEL1Q9GZM8 345 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 WWTR1Q9GZV5 400 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DNTTIP1Q9H147 329 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SDCBP2Q9H190 292 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 LRMDAQ9H2I8 198 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 KCNN2Q9H2S1 579 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TUBB1Q9H4B7 451 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 DHX33Q9H6R0 707 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 C8orf33Q9H7E9 229 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 TMEM185BQ9H7F4 350 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 KCNK13Q9HB14 408 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PARVGQ9HBI0 331 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MOV10Q9HCE1 1003 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 ZNF160Q9HCG1 818 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CHST11Q9NPF2 352 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TMEM51Q9NW97 253 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 PARPBPQ9NWS1 579 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 OSER1Q9NX31 292 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RNF186Q9NXI6 227 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 GAR1Q9NY12 217 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 SPHK1Q9NYA1 384 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NPAP1Q9NZP6 1156 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 EPHA6Q9UF33 1036 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 MTRF1LQ9UGC7 380 aaKnown RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 PACSIN2Q9UNF0 486 aaPredicted RBP1.92□□□□□ -2.1
RTF1-207ENST00000561076 FOXJ3Q9UPW0 622 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TNNQ9UQP3 1299 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 TMED7Q9Y3B3 224 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 CHST2Q9Y4C5 530 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NPTNQ9Y639 398 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 FKBP7Q9Y680 259 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 SLC30A1Q9Y6M5 507 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 RNF215Q9Y6U7 377 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 NINLQ9Y2I6 1382 aa1.92□□□□□ -2.1
RTF1-207ENST00000561076 XDHP47989 1333 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 MAP3K19Q56UN5 1328 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 WDR33Q9C0J8 1336 aaKnown RBP1.91□□□□□ -2.1
RTF1-207ENST00000561076 RB1CC1Q8TDY2 1594 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms