RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ROGDIQ9GZN7 287 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 AICDAQ9GZX7 198 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 VCX3BQ9H321 246 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 MIEF1Q9NQG6 463 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 PRDM7Q9NQW5 492 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 SLC6A13Q9NSD5 602 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 TAS2R7Q9NYW3 318 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 ZNF282Q9UDV7 671 aaPredicted RBP16.31■□□□□ 0.2
HDDC3-206ENST00000561036 EGFL7Q9UHF1 273 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 POMT2Q9UKY4 750 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 PCDHGB4Q9UN71 923 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 KLHL20Q9Y2M5 609 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 AP4S1Q9Y587 144 aa16.31■□□□□ 0.2
HDDC3-206ENST00000561036 ARHGEF17Q96PE2 2063 aaPredicted RBP16.31■□□□□ 0.2
HDDC3-206ENST00000561036 A0A1B0GTW7 788 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ELOVL7A1L3X0 281 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 URADA6NGE7 173 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 CLIC1O00299 241 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 CASQ2O14958 399 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ERI3O43414 337 aaKnown RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 LAMTOR5O43504 91 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 NOBOXO60393 691 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 PIAS2O75928 621 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 GSNP06396 782 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 SLC35G6P0C7Q6 338 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 GNSP15586 552 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 GGT1P19440 569 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ATP5A1P25705 553 aaKnown RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 GZMMP51124 257 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 PLA2G16P53816 162 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ATXN3P54252 364 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 OR4D2P58180 307 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 MC1RQ01726 317 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 SLC9A5Q14940 896 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 GTDC1Q4AE62 458 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ZNF385BQ569K4 471 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 LYSMD4Q5XG99 296 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 MRM1Q6IN84 353 aaKnown RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 SERPINA11Q86U17 422 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 TICAM1Q8IUC6 712 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 SFTPA2Q8IWL1 248 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 MICU2Q8IYU8 434 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 CLECL1Q8IZS7 167 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 OR10A6Q8NH74 314 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 FAM120BQ96EK7 910 aaKnown RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 REXO5Q96IC2 774 aaKnown RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 OR2A5Q96R48 311 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ZFYVE21Q9BQ24 234 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 C17orf62Q9BQA9 187 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 FAIM2Q9BWQ8 316 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ABCG4Q9H172 646 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 SEMA6CQ9H3T2 930 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 KLHL31Q9H511 634 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 IKZF5Q9H5V7 419 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 GORASP2Q9H8Y8 452 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 CCM2LQ9NUG4 571 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-206ENST00000561036 ARMC1Q9NVT9 282 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 EHD3Q9NZN3 535 aa16.3■□□□□ 0.2
HDDC3-206ENST00000561036 C1orf226A1L170 272 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 GSTA4O15217 222 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 TMPRSS11DO60235 418 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 UBXN7O94888 489 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 B3GALT4O96024 378 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 PDGFBP01127 241 aaPredicted RBP16.29■□□□□ 0.2
HDDC3-206ENST00000561036 FAM58BPP0C7Q3 252 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 HOXB3P14651 431 aaPredicted RBP16.29■□□□□ 0.2
HDDC3-206ENST00000561036 ENGP17813 658 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 GPX2P18283 190 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 HIST1H1TP22492 207 aaPredicted RBP16.29■□□□□ 0.2
HDDC3-206ENST00000561036 CTSKP43235 329 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 MAZP56270 477 aaKnown RBP16.29■□□□□ 0.2
HDDC3-206ENST00000561036 POLE2P56282 527 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 C14orf28Q4W4Y0 310 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 GLYATQ6IB77 296 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 ERICH5Q6P6B1 374 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 RNF111Q6ZNA4 994 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 RNF44Q7L0R7 432 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 GPR155Q7Z3F1 870 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 SPPL2CQ8IUH8 684 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 ZNF655Q8N720 491 aaPredicted RBP16.29■□□□□ 0.2
HDDC3-206ENST00000561036 ACOT4Q8N9L9 421 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 CAMKVQ8NCB2 501 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 OR4A15Q8NGL6 344 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 NRG4Q8WWG1 115 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 GAB3Q8WWW8 586 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 LYARQ9NX58 379 aaKnown RBP16.29■□□□□ 0.2
HDDC3-206ENST00000561036 SUSD2Q9UGT4 822 aa16.29■□□□□ 0.2
HDDC3-206ENST00000561036 PRUNE2Q8WUY3 3088 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 TCRBV5S2A0A599 114 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 DHRS12A0PJE2 317 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 PPM1DO15297 605 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 PEX1O43933 1283 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 CTSVO60911 334 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 ABCB1P08183 1280 aaPredicted RBP16.28■□□□□ 0.2
HDDC3-206ENST00000561036 SMIM10L1P0DMW3 83 aa16.28■□□□□ 0.2
HDDC3-206ENST00000561036 HOXB6P17509 224 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms