RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 AKAP6Q13023 2319 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 A8MVJ9 347 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 PSMD12O00232 456 aaPredicted RBP17.24■□□□□ 0.35
TPM1-226ENST00000560959 SYT5O00445 386 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 SUSD5O60279 629 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 ZFAND5O76080 213 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 GLSO94925 669 aaPredicted RBP17.24■□□□□ 0.35
TPM1-226ENST00000560959 ZNF888P0CJ79 500 aaPredicted RBP17.24■□□□□ 0.35
TPM1-226ENST00000560959 SMIM10L1P0DMW3 83 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 AHRP35869 848 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 GPR143P51810 404 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 NR0B1P51843 470 aaKnown RBP17.24■□□□□ 0.35
TPM1-226ENST00000560959 DGKQP52824 942 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 OLR1P78380 273 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 SARNPP82979 210 aaKnown RBP17.24■□□□□ 0.35
TPM1-226ENST00000560959 PLGLB1Q02325 96 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 LTBQ06643 244 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 KIF5AQ12840 1032 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 SP140Q13342 867 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 ZNF470Q6ECI4 717 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 RTL6Q6ICC9 239 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 ZNF585AQ6P3V2 769 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 RAD9BQ6WBX8 426 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 LIX1LQ8IVB5 337 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 CPNE9Q8IYJ1 553 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 ACRBPQ8NEB7 543 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 UTP15Q8TED0 518 aaKnown RBP17.24■□□□□ 0.35
TPM1-226ENST00000560959 SMIM10Q96HG1 83 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 SMC6Q96SB8 1091 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 CCDC77Q9BR77 488 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 ATG10Q9H0Y0 220 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 HPF1Q9NWY4 346 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 B4GALT7Q9UBV7 327 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 ERVK-11Q9UQG0 969 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 PLEKHA6Q9Y2H5 1048 aa17.24■□□□□ 0.35
TPM1-226ENST00000560959 A8MUA0 341 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 AQP7O14520 342 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 MYO1DO94832 1006 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 RIPPLY2Q5TAB7 128 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 UGT3A1Q6NUS8 523 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 TRILQ7L0X0 811 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 CDC20BQ86Y33 519 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 PALM2Q8IXS6 379 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 GPATCH11Q8N954 259 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 OR5M9Q8NGP3 310 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 SNF8Q96H20 258 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 TTTY12Q9BZ98 90 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 TRIM5Q9C035 493 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
TPM1-226ENST00000560959 ZNF223Q9UK11 482 aaPredicted RBP17.23■□□□□ 0.35
TPM1-226ENST00000560959 PINLYPA6NC86 204 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 SYNDIG1LA6NDD5 238 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 A6NNC1 897 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 B3GALT4O96024 378 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 CNR1P21554 472 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 SCTRP47872 440 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 CTBP1Q13363 440 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 THOC5Q13769 683 aaKnown RBP17.22■□□□□ 0.35
TPM1-226ENST00000560959 DHX34Q14147 1143 aaKnown RBP17.22■□□□□ 0.35
TPM1-226ENST00000560959 DAZAP2Q15038 168 aaPredicted RBP17.22■□□□□ 0.35
TPM1-226ENST00000560959 HYAL4Q2M3T9 481 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 DUPD1Q68J44 220 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 GK5Q6ZS86 529 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 DENND6AQ8IWF6 608 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 FAM109AQ8N4B1 249 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 TRPV3Q8NET8 790 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 OR56A3Q8NH54 315 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 FAM222BQ8WU58 562 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 SARAFQ96BY9 339 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 FAM173AQ9BQD7 235 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 IL1RL2Q9HB29 575 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 FBXO6Q9NRD1 293 aaPredicted RBP17.22■□□□□ 0.35
TPM1-226ENST00000560959 ADAMTS6Q9UKP5 1117 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 PCDHGB3Q9Y5G1 929 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 ZNF407Q9C0G0 2248 aa17.22■□□□□ 0.35
TPM1-226ENST00000560959 FLNAP21333 2647 aaKnown RBP17.22■□□□□ 0.35
TPM1-226ENST00000560959 DNAJC13O75165 2243 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 FAM166BA8MTA8 275 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 AVILO75366 819 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 HIST1H2AGP0C0S8 130 aaPredicted RBP17.21■□□□□ 0.35
TPM1-226ENST00000560959 GABRA1P14867 456 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 HIST1H2ADP20671 130 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 PTMSP20962 102 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 ADH7P40394 386 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 RGS4P49798 205 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 SIX1Q15475 284 aaPredicted RBP17.21■□□□□ 0.35
TPM1-226ENST00000560959 SCUBE1Q8IWY4 988 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 RNF10Q8N5U6 811 aaKnown RBP17.21■□□□□ 0.35
TPM1-226ENST00000560959 RNF214Q8ND24 703 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 EEF1AKMT1Q8WVE0 214 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 ASB15Q8WXK1 588 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 NCLNQ969V3 563 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 ALKBH8Q96BT7 664 aaKnown RBP17.21■□□□□ 0.35
TPM1-226ENST00000560959 HIST1H2AHQ96KK5 128 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 HIST1H2AJQ99878 128 aa17.21■□□□□ 0.35
TPM1-226ENST00000560959 AARSD1Q9BTE6 412 aaKnown RBP17.21■□□□□ 0.35
TPM1-226ENST00000560959 H2AFJQ9BTM1 129 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms