RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 HUS1BQ8NHY5 278 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 WDR20Q8TBZ3 569 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 IMMP1LQ96LU5 166 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 WDR77Q9BQA1 342 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 RBCK1Q9BYM8 510 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF700Q9H0M5 742 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 DCDC2Q9UHG0 476 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF225Q9UK10 706 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 PCDHGB7Q9Y5F8 929 aa14.39□□□□□ -0.11
SNRPA1-213ENST00000560856 FAM227AF5H4B4 570 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 G3V2L1 256 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 SCELO95171 688 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 TGFB1P01137 390 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 PROCP04070 461 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 C8orf89P0DMQ9 161 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 PCNAP12004 261 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 RNH1P13489 461 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 SERPINB1P30740 379 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 CRHR1P34998 444 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 CDH13P55290 713 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 HERVK_113P63132 956 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 EEF1A2Q05639 463 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 RAPSNQ13702 412 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 CPSF6Q16630 551 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 MINDY4Q4G0A6 757 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 DEPDC1Q5TB30 811 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF793Q6ZN11 406 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 NDUFAF7Q7L592 441 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 ANKRD37Q7Z713 158 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 PARP9Q8IXQ6 854 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 PSMF1Q92530 271 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 TSLPQ969D9 159 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 CDK15Q96Q40 435 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 ERVK-6Q9BXR3 956 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 OR51B5Q9H339 312 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF160Q9HCG1 818 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 DMRT3Q9NQL9 472 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 GPR83Q9NYM4 423 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 KCMF1Q9P0J7 381 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 LGALS13Q9UHV8 139 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 ADGRE2Q9UHX3 823 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 PCDHGA11Q9Y5H2 935 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 CLDN16Q9Y5I7 305 aa14.38□□□□□ -0.11
SNRPA1-213ENST00000560856 IGKV3D-11A0A0A0MRZ8 115 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 IGHV3-20A0A0C4DH32 117 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TLDC2A0PJX2 215 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 MAGEB17A8MXT2 336 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 RTCAO00442 366 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 SUV39H1O43463 412 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 PLIN3O60664 434 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 GLRA3O75311 464 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 CDC123O75794 336 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 CLDN9O95484 217 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 KRT15P19012 456 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TAC1P20366 129 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 IMPDH1P20839 514 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 ATP5A1P25705 553 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 CCNG1P51959 295 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 PGDP52209 483 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 PRKAA2P54646 552 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 BTG2P78543 158 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 ZRSR2Q15696 482 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 GGTA1PQ4G0N0 100 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TMEM35AQ53FP2 167 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF678Q5SXM1 525 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 KHDRBS2Q5VWX1 349 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 FAM219BQ5XKK7 198 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TRIM40Q6P9F5 258 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 CPEB2Q7Z5Q1 589 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TMEM52Q8NDY8 209 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 CMTM7Q96FZ5 175 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 VPS50Q96JG6 964 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TMEM237Q96Q45 408 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 SERINC2Q96SA4 455 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 MTERF1Q99551 399 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 TMEM109Q9BVC6 243 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 ROPN1BQ9BZX4 212 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 C12orf65Q9H3J6 166 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 ROPN1Q9HAT0 212 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 SEMA4BQ9NPR2 832 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 PSD3Q9NYI0 1048 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 PPT2Q9UMR5 302 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 NBASA2RRP1 2371 aa14.37□□□□□ -0.11
SNRPA1-213ENST00000560856 NSG1A0A0A6YYJ2 146 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 FOXE1O00358 373 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 CYR61O00622 381 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 B4GALT2O60909 372 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 ETHE1O95571 254 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 CELA2AP08217 269 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 TSPAN8P19075 237 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 CERS1P27544 350 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 HPDP32754 393 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 NEK2P51955 445 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 HNRNPFP52597 415 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 MTTPP55157 894 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 LIM2P55344 173 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms