RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MCOLN2Q8IZK6 566 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ARRDC3Q96B67 414 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 LRRC39Q96DD0 335 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC45A3Q96JT2 553 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 NPAS2Q99743 824 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 UCK2Q9BZX2 261 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 WDR26Q9H7D7 661 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TUFT1Q9NNX1 390 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 DMAC2Q9NW81 257 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SPATA6Q9NWH7 488 aaPredicted RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC39A1Q9NY26 324 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CLEC4AQ9UMR7 237 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 OAZ3Q9UMX2 235 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 U3KQE9 123 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TANC1Q9C0D5 1861 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PRORSD1PA6NEY8 169 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 GLRA3O75311 464 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TULP3O75386 442 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CALB1P05937 261 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CYP3A4P08684 503 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 FASP25445 335 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 HTR7P34969 479 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 FASLGP48023 281 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SERPINB9P50453 376 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PTTG1IPP53801 180 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 RIN1Q13671 783 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 COL28A1Q2UY09 1125 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 EPC2Q52LR7 807 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ATF7IP2Q5U623 682 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PRSS42Q7Z5A4 293 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 DHFR2Q86XF0 187 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC22A15Q8IZD6 547 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF781Q8N8C0 355 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TMIEQ8NEW7 156 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ZBED3Q96IU2 234 aaPredicted RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 GAL3ST4Q96RP7 486 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 BDH2Q9BUT1 245 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TRAF4Q9BUZ4 470 aaPredicted RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TMEM168Q9H0V1 697 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PPA2Q9H2U2 334 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 OR51B5Q9H339 312 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 FBXO34Q9NWN3 711 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TAS2R9Q9NYW1 312 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CD300AQ9UGN4 299 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CDC42EP3Q9UKI2 254 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF99A8MXY4 864 aaPredicted RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 LILRB5O75023 590 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF623O75123 536 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SCGB2A1O75556 95 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SNAP29O95721 258 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CHRNA1P02708 482 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 HTR1AP08908 422 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 HOXD4P09016 255 aaPredicted RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 GJA4P35212 333 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MAPKAPK2P49137 400 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 WNT3P56703 355 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF45Q02386 682 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TAP2Q03519 686 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 TNK1Q13470 666 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 FHL3Q13643 280 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 AFTPHQ6ULP2 937 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MACC1Q6ZN28 852 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 HTR3DQ70Z44 454 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 STRADAQ7RTN6 431 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 DDIASQ8IXT1 998 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MICU2Q8IYU8 434 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MMP21Q8N119 569 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SMG8Q8ND04 991 aaKnown RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MCFD2Q8NI22 146 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 FAM110BQ8TC76 370 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 DEDD2Q8WXF8 326 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MUS81Q96NY9 551 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CPXM1Q96SM3 734 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ING2Q9H160 280 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MMP27Q9H306 513 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 EMC3Q9P0I2 261 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 OSGIN1Q9UJX0 560 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 X6R8D5 127 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SMCHD1A6NHR9 2005 aa6.46□□□□□ -1.37
TSPAN3-209ENST00000560715 LOXHD1Q8IVV2 1947 aa6.46□□□□□ -1.37
TSPAN3-209ENST00000560715 TRAV6A0A075B6T7 132 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 A0A1W2PRG6 482 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM149AA5PLN7 773 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PRSS44E7EML9 344 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 F8W810 466 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 M0QZQ0 153 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 M0R082 166 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 BCAT2O15382 392 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 GPRIN2O60269 458 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ITGA10O75578 1167 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 VNN2O95498 520 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 PCCBP05166 539 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 UNGP13051 313 aaPredicted RBP6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 CD19P15391 556 aa6.46□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF30P17039 623 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms