RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CLIC3O95833 236 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 DDCP20711 480 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 EEF1B2P24534 225 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 FRKP42685 505 aaPredicted RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 TSFMP43897 325 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 RAB15P59190 212 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TAS2R50P59544 299 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 RPS21P63220 83 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 HBA1P69905 142 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 KCNJ10P78508 379 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 VLDLRP98155 873 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 EEF1A2Q05639 463 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 MESP2Q0VG99 397 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 GAB1Q13480 694 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 DCTN2Q13561 401 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 SCARB2Q14108 478 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 PLCL1Q15111 1095 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 WSCD2Q2TBF2 565 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TMEM35AQ53FP2 167 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 ZNF385BQ569K4 471 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 KIAA1614Q5VZ46 1190 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 AP1ARQ63HQ0 302 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TANGO2Q6ICL3 276 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 CRTC3Q6UUV7 619 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 ISLR2Q6UXK2 745 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 FAM83HQ6ZRV2 1179 aaPredicted RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 FAM92BQ6ZTR7 304 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 RBM23Q86U06 439 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 NUDT13Q86X67 352 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 ARMC8Q8IUR7 673 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 SPARTQ8N0X7 666 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TBC1D19Q8N5T2 526 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TP53I13Q8NBR0 393 aaPredicted RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 OR5AR1Q8NGP9 310 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 PSMA8Q8TAA3 256 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 IPCEF1Q8WWN9 437 aaPredicted RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 RASSF5Q8WWW0 418 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 GEMIN6Q8WXD5 167 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 FOXJ1Q92949 421 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 MENTQ9BUN1 341 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 SARGQ9BW04 601 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 NLNQ9BYT8 704 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 EPS8L2Q9H6S3 715 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 WDR26Q9H7D7 661 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 MIEF1Q9NQG6 463 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 ACSS1Q9NUB1 689 aaPredicted RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TAS2R7Q9NYW3 318 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 EHD3Q9NZN3 535 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 KIF17Q9P2E2 1029 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 CIDEBQ9UHD4 219 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 UTS2RQ9UKP6 389 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 NDRG4Q9ULP0 352 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 ABCG2Q9UNQ0 655 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 ERVK-11Q9UQG0 969 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 SAMHD1Q9Y3Z3 626 aaKnown RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 HEBP2Q9Y5Z4 205 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 TRBC2A0A5B9 178 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 PRR19A6NJB7 356 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 H3BMQ9 156 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 GUCY1B2O75343 617 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 ANGPTL1O95841 491 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 C6orf47O95873 294 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 B3GALT4O96024 378 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 TGFB1P01137 390 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 PCCBP05166 539 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 DRD2P14416 443 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 ELK4P28324 431 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 TPP2P29144 1249 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 BSGP35613 385 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 CHI3L1P36222 383 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 PIGAP37287 484 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 PRIM2P49643 509 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 ANXA11P50995 505 aaKnown RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 RAB28P51157 221 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 DAPP51397 102 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 CLCNKAP51800 687 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 HMGA2P52926 109 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 IST1P53990 364 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 PCBP3P57721 371 aaKnown RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 TAS2R38P59533 333 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 CDK5R2Q13319 367 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 C11orf91Q3C1V1 193 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 MLIPQ5VWP3 458 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 EGFLAMQ63HQ2 1017 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 GTF2IRD2BQ6EKJ0 949 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 XAF1Q6GPH4 301 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 VN1R5Q7Z5H4 357 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 GTF2IRD2Q86UP8 949 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 NAGSQ8N159 534 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 TTC29Q8NA56 475 aaPredicted RBP9.27□□□□□ -0.93
RTF1-206ENST00000560447 PLA2G15Q8NCC3 412 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 OR2L8Q8NGY9 312 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 WDR48Q8TAF3 677 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 GIPC3Q8TF64 312 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 MUL1Q969V5 352 aa9.27□□□□□ -0.93
RTF1-206ENST00000560447 RGMAQ96B86 450 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms