RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 KIR3DP1A8MWS1 328 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 SYT5O00445 386 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 OR1F1O43749 312 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 PRKNO60260 465 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 ZNF888P0CJ79 500 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 SMIM10L1P0DMW3 83 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 HOXC12P31275 282 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 SSR4P51571 173 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 SKP1P63208 163 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 HYAL2Q12891 473 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 NAE1Q13564 534 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 XKR6Q5GH73 641 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 RAD9BQ6WBX8 426 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 C16orf47Q6ZP98 133 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 TRILQ7L0X0 811 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 SLC13A5Q86YT5 568 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 CPNE9Q8IYJ1 553 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 ACRBPQ8NEB7 543 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 SMIM10Q96HG1 83 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 CLDN16Q9Y5I7 305 aa18.36■□□□□ 0.53
RABGGTA-214ENST00000560163 TRBC2A0A5B9 178 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 EIF3FO00303 357 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 MYO1DO94832 1006 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 CCND1P24385 295 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 BASP1P80723 227 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 PLGLB1Q02325 96 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 CTBP1Q13363 440 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 PAMR1Q6UXH9 720 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 SLC22A16Q86VW1 577 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 DENND6AQ8IWF6 608 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 GPALPP1Q8IXQ4 340 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 GOT1L1Q8NHS2 421 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 VMP1Q96GC9 406 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 C18orf12Q96KH6 178 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 MDFIQ99750 246 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 ERVK-11Q9UQG0 969 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 EML6Q6ZMW3 1958 aa18.35■□□□□ 0.53
RABGGTA-214ENST00000560163 FBN1P35555 2871 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 TCRBV7S3A2A0A539 114 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 CTAGE15A4D2H0 777 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 ACOT7O00154 380 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 AQP7O14520 342 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 SLC16A5O15375 505 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 WDR1O75083 606 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 AVILO75366 819 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 OR2J2O76002 312 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 ATE1O95260 518 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 RNH1P13489 461 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 PEX19P40855 299 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 CCR8P51685 355 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 CDK16Q00536 496 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 TIAL1Q01085 375 aaKnown RBP eCLIP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 DAZAP2Q15038 168 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 SIX1Q15475 284 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 DEFB113Q30KQ7 82 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 NDUFAF5Q5TEU4 345 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 ARMC3Q5W041 872 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 ZNF470Q6ECI4 717 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 C4orf22Q6V702 233 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 ABHD13Q7L211 337 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 CTAGE6Q86UF2 777 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 TMEM251Q8N6I4 163 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 NCLNQ969V3 563 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 OR4K3Q96R72 315 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 HAUS8Q9BT25 410 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 SPNS1Q9H2V7 528 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 LIN28AQ9H9Z2 209 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 PARVBQ9HBI1 364 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 FBXO6Q9NRD1 293 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 ZFP69BQ9UJL9 534 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 CBLCQ9ULV8 474 aa18.34■□□□□ 0.53
RABGGTA-214ENST00000560163 CTAGE9A4FU28 777 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 A8MVJ9 347 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 SUSD5O60279 629 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 OR6B1O95007 311 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 IPO7O95373 1038 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 TPSB2P20231 275 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 MAGEA5P43359 124 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 FOXO1Q12778 655 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 TPSAB1Q15661 275 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 HYAL4Q2M3T9 481 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 FLYWCH1Q4VC44 716 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 RIPPLY2Q5TAB7 128 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 IL20RBQ6UXL0 311 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 WDR53Q7Z5U6 358 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 GAS2L3Q86XJ1 694 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 PRIMA1Q86XR5 153 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 KRTAP1-3Q8IUG1 177 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 SCUBE1Q8IWY4 988 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 ARMC2Q8NEN0 867 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 EEF1AKMT1Q8WVE0 214 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 SLCO2A1Q92959 643 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 ALKBH8Q96BT7 664 aaKnown RBP18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 SNF8Q96H20 258 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 PDLIM2Q96JY6 352 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 CNPPD1Q9BV87 410 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 TSGA10Q9BZW7 698 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 DMRT3Q9NQL9 472 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 HPF1Q9NWY4 346 aa18.33■□□□□ 0.52
RABGGTA-214ENST00000560163 MYOTQ9UBF9 498 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms