RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 DIAPH2O60879 1101 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 PEX11AO75192 247 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 RDH16O75452 317 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 RSL1D1O76021 490 aaKnown RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SEMA3DO95025 777 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 NSA2O95478 260 aaKnown RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 GBAP04062 536 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 JUNP05412 331 aaKnown RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 KLK1P06870 262 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SMIM10L1P0DMW3 83 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 FBLP22087 321 aaKnown RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 OLR1P78380 273 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SLAMF1Q13291 335 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SLC9A5Q14940 896 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 NKAIN1Q4KMZ8 207 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 ATP6AP1LQ52LC2 224 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SPIN4Q56A73 249 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 CCNYL2Q5T2Q4 361 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 ARHGAP40Q5TG30 622 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 NXNQ6DKJ4 435 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 Q6ZSR9 355 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 NUDT13Q86X67 352 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 METTL4Q8N3J2 472 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 ARHGEF39Q8N4T4 335 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 ACOT4Q8N9L9 421 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 OR2T11Q8NH01 316 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 CHTF18Q8WVB6 975 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 MVB12AQ96EY5 273 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 APIPQ96GX9 242 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SMIM10Q96HG1 83 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 PPP3R2Q96LZ3 170 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 C3orf30Q96M34 536 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SERINC2Q96SA4 455 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 LRTM1Q9HBL6 345 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 NPHS2Q9NP85 383 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 PRDM7Q9NQW5 492 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 C1orf109Q9NX04 203 aa13.6□□□□□ -0.23
SMAD6-204ENST00000559931 IFT80Q9P2H3 777 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 GPN3Q9UHW5 284 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 TMEM184BQ9Y519 407 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-204ENST00000559931 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 FRYQ5TBA9 3013 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GOLGA8QA0A0J9YX86 632 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GNG14A0A1W2PPG7 69 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GOLGA8OA6NCC3 632 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 CDRT15L2A8MXV6 281 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 C4orf51C9J302 202 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GOLGA8NF8WBI6 632 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 H0YIG0 161 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 VPS4BO75351 444 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 TROVE2P10155 538 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 HIST1H1TP22492 207 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 ATP5A1P25705 553 aaKnown RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 CERS1P27544 350 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 CD82P27701 267 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 LSP1P33241 339 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 BSGP35613 385 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GCGRP47871 477 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 ARFIP1P53367 373 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 AQP5P55064 265 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 SNRPNP63162 240 aaKnown RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 FOXK2Q01167 660 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 TBL3Q12788 808 aaKnown RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 TUBB8Q3ZCM7 444 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 VWA5B1Q5TIE3 1220 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 MLIPQ5VWP3 458 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 FAM199XQ6PEV8 388 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 IGF2-ASQ6U949 168 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 RNF165Q6ZSG1 346 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 PDSS2Q86YH6 399 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 DSELQ8IZU8 1212 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 NLGN4XQ8N0W4 816 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 ESX1Q8N693 406 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 NLGN4YQ8NFZ3 816 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 CHMP6Q96FZ7 201 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 ZNF578Q96N58 590 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 LRFN5Q96NI6 719 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GBP5Q96PP8 586 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
SMAD6-204ENST00000559931 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 MEAF6Q9HAF1 191 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 ASCL3Q9NQ33 180 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 HCN3Q9P1Z3 774 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 TRPC4Q9UBN4 977 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GIMAP2Q9UG22 337 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 CCDC88CQ9P219 2028 aa13.59□□□□□ -0.23
SMAD6-204ENST00000559931 GMNCA6NCL1 334 aa13.58□□□□□ -0.24
SMAD6-204ENST00000559931 C9J4A7 227 aa13.58□□□□□ -0.24
SMAD6-204ENST00000559931 PSMD12O00232 456 aaPredicted RBP13.58□□□□□ -0.24
SMAD6-204ENST00000559931 CHST10O43529 356 aa13.58□□□□□ -0.24
SMAD6-204ENST00000559931 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
SMAD6-204ENST00000559931 TGDSO95455 350 aa13.58□□□□□ -0.24
SMAD6-204ENST00000559931 RORAP35398 523 aa13.58□□□□□ -0.24
SMAD6-204ENST00000559931 TSFMP43897 325 aaKnown RBP13.58□□□□□ -0.24
SMAD6-204ENST00000559931 MAPK12P53778 367 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms