RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 STMN1P16949 149 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 GNAZP19086 355 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 GGT5P36269 586 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 DCTP40126 519 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 RAB10P61026 200 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 BMPR2Q13873 1038 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 OR1C1Q15619 314 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 TMIGD1Q6UXZ0 262 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 QSOX2Q6ZRP7 698 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 TBC1D19Q8N5T2 526 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 SNX31Q8N9S9 440 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 ZNF354BQ96LW1 612 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 LRRC1Q9BTT6 524 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 ALG9Q9H6U8 611 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 IGSF5Q9NSI5 407 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 DNAJC11Q9NVH1 559 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 CD274Q9NZQ7 290 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 ZNF223Q9UK11 482 aaPredicted RBP16.61■□□□□ 0.25
HDDC3-205ENST00000559898 MYO7BQ6PIF6 2116 aa16.61■□□□□ 0.25
HDDC3-205ENST00000559898 UNC79Q9P2D8 2635 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 LRRC14BA6NHZ5 514 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 UBXN8O00124 270 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 PRKNO60260 465 aaPredicted RBP16.6■□□□□ 0.25
HDDC3-205ENST00000559898 NEURL1O76050 574 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 UNC5CO95185 931 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 STSP08842 583 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 RNH1P13489 461 aaKnown RBP16.6■□□□□ 0.25
HDDC3-205ENST00000559898 IL10P22301 178 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 CERS1P27544 350 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 TPP2P29144 1249 aaPredicted RBP16.6■□□□□ 0.25
HDDC3-205ENST00000559898 PLA2G16P53816 162 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 SLMAPQ14BN4 828 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 EXT1Q16394 746 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 MEP1AQ16819 746 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 GFRALQ6UXV0 394 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 C16orf47Q6ZP98 133 aaPredicted RBP16.6■□□□□ 0.25
HDDC3-205ENST00000559898 CYS1Q717R9 158 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 ZNF572Q7Z3I7 529 aaPredicted RBP16.6■□□□□ 0.25
HDDC3-205ENST00000559898 UBE3DQ7Z6J8 389 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 CLNKQ7Z7G1 428 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 ISCA2Q86U28 154 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 FAM47BQ8NA70 645 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 PDPRQ8NCN5 879 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 KIAA1191Q96A73 305 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 F2RL3Q96RI0 385 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 ABI3Q9P2A4 366 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 COPG2Q9UBF2 871 aa16.6■□□□□ 0.25
HDDC3-205ENST00000559898 TEX15Q9BXT5 2789 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 SAGE2PA6NJ88 616 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 RTCAO00442 366 aaKnown RBP16.59■□□□□ 0.25
HDDC3-205ENST00000559898 CCNT2O60583 730 aaKnown RBP16.59■□□□□ 0.25
HDDC3-205ENST00000559898 TFEBP19484 476 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 XKR6Q5GH73 641 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 RNFT1Q5M7Z0 435 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 GRTP1Q5TC63 336 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 FAM219BQ5XKK7 198 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 ZNF793Q6ZN11 406 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 SCUBE1Q8IWY4 988 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 THAP3Q8WTV1 239 aaPredicted RBP16.59■□□□□ 0.25
HDDC3-205ENST00000559898 CDKL2Q92772 493 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 GAL3ST3Q96A11 431 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 NXNL1Q96CM4 212 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 TSPAN17Q96FV3 270 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 SCMH1Q96GD3 660 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 ATOH8Q96SQ7 321 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 LIN28AQ9H9Z2 209 aaKnown RBP16.59■□□□□ 0.25
HDDC3-205ENST00000559898 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 ZDHHC18Q9NUE0 388 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 TXNDC16Q9P2K2 825 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 SH3BGRL2Q9UJC5 107 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 RNF112Q9ULX5 631 aa16.59■□□□□ 0.25
HDDC3-205ENST00000559898 UTP11Q9Y3A2 253 aaKnown RBP16.59■□□□□ 0.25
HDDC3-205ENST00000559898 H2AFYO75367 372 aaKnown RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 STK16O75716 305 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 JAK1P23458 1154 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 SPRP35270 261 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 NR0B1P51843 470 aaKnown RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 CHIT1Q13231 466 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 ADPRMQ3LIE5 342 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 SULT1C3Q6IMI6 304 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 NCCRP1Q6ZVX7 275 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 GALNTL5Q7Z4T8 443 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 RPS19BP1Q86WX3 136 aaKnown RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 CENPLQ8N0S6 344 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 APCDD1LQ8NCL9 501 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 KCTD4Q8WVF5 259 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 UTP23Q9BRU9 249 aaKnown RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 SORBS1Q9BX66 1292 aaKnown RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 NT5DC2Q9H857 520 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 PRDM7Q9NQW5 492 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 PNO1Q9NRX1 252 aaKnown RBP16.58■□□□□ 0.24
HDDC3-205ENST00000559898 TEKT2Q9UIF3 430 aa16.58■□□□□ 0.24
HDDC3-205ENST00000559898 EML6Q6ZMW3 1958 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 URADA6NGE7 173 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 CYR61O00622 381 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 CLGNO14967 610 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 CLEC3AO75596 197 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 MYO1DO94832 1006 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 GSTA2P09210 222 aa16.57■□□□□ 0.24
HDDC3-205ENST00000559898 MTHFD2P13995 350 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms