RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 A0A1W2PPK0 400 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 MED19A0JLT2 244 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 MACROD2A1Z1Q3 448 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 GMFGO60234 142 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 SCGB2A1O75556 95 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 AP2A2O94973 939 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 MOCS2O96007 188 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 THRBP10828 461 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 UGT1A6P19224 532 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 CEACAM8P31997 349 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 PTGER4P35408 488 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 SLC6A12P48065 614 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 CNN1P51911 297 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 CLDN15P56746 228 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 GSDMDP57764 484 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 SNRPD1P62314 119 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 CHIT1Q13231 466 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 GPM6BQ13491 265 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 RAPSNQ13702 412 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 TEAD2Q15562 447 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 ADAMTSL4-AS1Q5T5F5 129 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 ARHGEF16Q5VV41 709 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 PRSS55Q6UWB4 352 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 BTNL8Q6UX41 500 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 TMPRSS11BQ86T26 416 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 AMIGO1Q86WK6 493 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 TMEM126BQ8IUX1 230 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 UNC5CLQ8IV45 518 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 KIAA0895Q8NCT3 520 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 PPFIBP2Q8ND30 876 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 OR52K2Q8NGK3 314 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 OR2T6Q8NHC8 308 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 FGFBP3Q8TAT2 258 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 SLC26A7Q8TE54 656 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 SSMEM1Q8WWF3 244 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 PROX1Q92786 737 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 P2RX5Q93086 422 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 MOCOSQ96EN8 888 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 RAD9AQ99638 391 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 SPAG8Q99932 426 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 RBM4BQ9BQ04 359 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 DDX50Q9BQ39 737 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 ZNF559Q9BR84 538 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 IDI2Q9BXS1 227 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 ACPTQ9BZG2 426 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 TRIM6Q9C030 488 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 POLR1EQ9GZS1 481 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 UBQLN3Q9H347 655 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 CUEDC2Q9H467 287 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 VPS37BQ9H9H4 285 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 ZNF71Q9NQZ8 489 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 GPR173Q9NS66 373 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 ZCCHC3Q9NUD5 404 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 NPAP1Q9NZP6 1156 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 FLRT3Q9NZU0 649 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 KLHL8Q9P2G9 620 aaPredicted RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 ZNF510Q9Y2H8 683 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 PYGO1Q9Y3Y4 419 aa3.28□□□□□ -1.88
SPG11-218ENST00000559754 HBS1LQ9Y450 684 aaKnown RBP3.28□□□□□ -1.88
SPG11-218ENST00000559754 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.28□□□□□ -1.88
SPG11-218ENST00000559754 IGHV4-4A0A075B6R2 117 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 A0A087WW49 117 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 A0A087X0K7 114 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 IGHV4-61A0A0C4DH41 118 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 FAM230AA0A1W2PPH8 454 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 H0YIG0 161 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 E2F3O00716 465 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 TRMUO75648 421 aaKnown RBP3.27□□□□□ -1.89
SPG11-218ENST00000559754 ATP6AP2O75787 350 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 GSRP00390 522 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 IGHV4-59P01825 116 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 FUT1P19526 365 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 CBLP22681 906 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 GLRA2P23416 452 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 NOVP48745 357 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 CDH11P55287 796 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 IRX4P78413 519 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 MAT1AQ00266 395 aaKnown RBP3.27□□□□□ -1.89
SPG11-218ENST00000559754 SULT2A1Q06520 285 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 PNRC1Q12796 327 aaPredicted RBP3.27□□□□□ -1.89
SPG11-218ENST00000559754 OVGP1Q12889 678 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 ILF2Q12905 390 aaKnown RBP3.27□□□□□ -1.89
SPG11-218ENST00000559754 PLA2G7Q13093 441 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 GLIPR1L2Q4G1C9 344 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 BOLA3Q53S33 107 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 SYT14P1Q58G82 188 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 ATAD3BQ5T9A4 648 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 GRTP1Q5TC63 336 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 AGAP6Q5VW22 663 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 ASPGQ86U10 573 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 ZNF573Q86YE8 665 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 LAX1Q8IWV1 398 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 APCDD1Q8J025 514 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 ARHGAP24Q8N264 748 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 RNF148Q8N7C7 305 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 ZNF614Q8N883 585 aa3.27□□□□□ -1.89
SPG11-218ENST00000559754 RASGEF1AQ8N9B8 481 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms