RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 GRHL2Q6ISB3 625 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 NIPAL1Q6NVV3 410 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 TRIM40Q6P9F5 258 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 PAPD4Q6PIY7 484 aaKnown RBP12.13□□□□□ -0.47
BMP4-208ENST00000559642 IGFL2Q6UWQ7 119 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 ISLR2Q6UXK2 745 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 Q6ZS92 163 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 GOLGA7Q7Z5G4 137 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 MYLK4Q86YV6 388 aaPredicted RBP12.13□□□□□ -0.47
BMP4-208ENST00000559642 RNF175Q8N4F7 328 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 PTGR2Q8N8N7 351 aaPredicted RBP12.13□□□□□ -0.47
BMP4-208ENST00000559642 FAM47BQ8NA70 645 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 OR2L5Q8NG80 312 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 PPP4R1Q8TF05 950 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 FAR2Q96K12 515 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 F2RL3Q96RI0 385 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
BMP4-208ENST00000559642 EPS8L2Q9H6S3 715 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 ANGPTL3Q9Y5C1 460 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
BMP4-208ENST00000559642 CCDC189A1A4V9 331 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 PSMD12O00232 456 aaPredicted RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 RTCAO00442 366 aaKnown RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 E2F3O00716 465 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 EEF1DP29692 281 aaKnown RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 CASP2P42575 452 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 HNRNPFP52597 415 aaKnown RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 OR4D2P58180 307 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 GTF2H2Q13888 395 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 SLC29A2Q14542 456 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 INPP5JQ15735 1006 aaPredicted RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 HIST2H2ACQ16777 129 aaPredicted RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 GTF2H2CQ6P1K8 395 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 MED27Q6P2C8 311 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 RIPOR1Q6ZS17 1223 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 LAS2Q8IYD9 372 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 TMEM52Q8NDY8 209 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 ZNF473Q8WTR7 871 aaKnown RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 PHF21BQ96EK2 531 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 SEC16BQ96JE7 1060 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 CSF3RQ99062 836 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 MS4A8Q9BY19 250 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 ACTR8Q9H981 624 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 COPS7BQ9H9Q2 264 aaPredicted RBP12.12□□□□□ -0.47
BMP4-208ENST00000559642 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 PLA2G3Q9NZ20 509 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
BMP4-208ENST00000559642 TENM4Q6N022 2769 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 IGKV3D-11A0A0A0MRZ8 115 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 SAP18O00422 153 aaKnown RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 B3GALT2O43825 422 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 PRMT3O60678 531 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 RBP1P09455 135 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 ST13P50502 369 aaKnown RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 RAB38P57729 211 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 PCDH1Q08174 1060 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 PCBP2Q15366 365 aaKnown RBP eCLIP12.11□□□□□ -0.476e-7■■■■□ 25.6
BMP4-208ENST00000559642 FCRLBQ6BAA4 426 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 PLAG1Q6DJT9 500 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 ZNF793Q6ZN11 406 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 UBE3DQ7Z6J8 389 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 ATCAYQ86WG3 371 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 IQCKQ8N0W5 287 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 UBE2E3Q969T4 207 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 PTCHD1Q96NR3 888 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 NSUN5Q96P11 429 aaKnown RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 CDK15Q96Q40 435 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 SORBS1Q9BX66 1292 aaKnown RBP12.11□□□□□ -0.47
BMP4-208ENST00000559642 NTNG1Q9Y2I2 539 aa12.11□□□□□ -0.47
BMP4-208ENST00000559642 A0A088AWK7 358 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 A8MUA0 341 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 A8MUI8 341 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 TGFBR3LH3BV60 316 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 GOLGA8RI6L899 631 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 OR7A17O14581 309 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 SMIM24O75264 130 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 TGFB1P01137 390 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 SHBGP04278 402 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 SBK3P0C264 359 aa12.1□□□□□ -0.47
BMP4-208ENST00000559642 COL6A2P12110 1019 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms