RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C5AR2Q9P296 337 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 ZNF282Q9UDV7 671 aaPredicted RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 ASIC3Q9UHC3 531 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 NXT1Q9UKK6 140 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 COPG1Q9Y678 874 aaKnown RBP6.96□□□□□ -1.3
SPG11-213ENST00000558988 ICE1Q9Y2F5 2266 aa6.96□□□□□ -1.3
SPG11-213ENST00000558988 PCM1Q15154 2024 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 NSG1A0A0A6YYJ2 146 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 GOLGA6L10A0A0M3HER8 536 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 FAM237BA0A1B0GVD1 139 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 OR2A25A4D2G3 310 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 H7BY64 318 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 MYO1CO00159 1063 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 P2RX6O15547 441 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 SRPX2O60687 465 aaPredicted RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 PSIP1O75475 530 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 CCNDBP1O95273 360 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 MATN4O95460 622 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 SLC16A8O95907 504 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 HEXBP07686 556 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 CELA2AP08217 269 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 CXCR2P25025 360 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 ATP5DP30049 168 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 COILP38432 576 aaPredicted RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 EMP2P54851 167 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 MAT1AQ00266 395 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 Q0VFX4 171 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 NAA25Q14CX7 972 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 LONRF1Q17RB8 773 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 HSP90AA5PQ58FG0 334 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 ICE2Q659A1 982 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 PRMT9Q6P2P2 845 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 ZNF549Q6P9A3 640 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 MBOAT1Q6ZNC8 495 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 UBE2R2Q712K3 238 aaPredicted RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 RNF44Q7L0R7 432 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 KCNMB4Q86W47 210 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 HPS6Q86YV9 775 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 SLC35F6Q8N357 371 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 CATSPER1Q8NEC5 780 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 ZCCHC10Q8TBK6 192 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 COG1Q8WTW3 980 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 ZNF480Q8WV37 535 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 CFAP36Q96G28 342 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 VPS50Q96JG6 964 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 PBKQ96KB5 322 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 PRAP1Q96NZ9 151 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 MACROD1Q9BQ69 325 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 LHPPQ9H008 270 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 ATG10Q9H0Y0 220 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 XAB2Q9HCS7 855 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 PPANQ9NQ55 473 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 INTS10Q9NVR2 710 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 TRMT1Q9NXH9 659 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 UTP6Q9NYH9 597 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 PLA2G3Q9NZ20 509 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 PTGFRNQ9P2B2 879 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 SLC17A6Q9P2U8 582 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 SUCOQ9UBS9 1254 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 TRMT6Q9UJA5 497 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 FBXO5Q9UKT4 447 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 RUVBL1Q9Y265 456 aaKnown RBP6.95□□□□□ -1.3
SPG11-213ENST00000558988 NTNG1Q9Y2I2 539 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 JRKLQ9Y4A0 524 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 NUP210LQ5VU65 1888 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 DOCK10Q96BY6 2186 aa6.95□□□□□ -1.3
SPG11-213ENST00000558988 IGHV3-20A0A0C4DH32 117 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 IGKV1-8A0A0C4DH67 115 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 ZCWPW2A0A1B0GU75 182 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 FEZF1A0PJY2 475 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PABPN1LA6NDY0 278 aaKnown RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 ZNF839A8K0R7 811 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 IDSB3KWA1 339 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PRPF4O43172 522 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG11-213ENST00000558988 ZBTB14O43829 449 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 KLHL41O60662 606 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PHF2O75151 1096 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 JRKO75564 520 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 KLHL18O94889 574 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 HAUS5O94927 633 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 FKBP9O95302 570 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 HPP00738 406 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 IL1RNP18510 177 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 SAT1P21673 171 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 BMP5P22003 454 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 CARSP49589 748 aaKnown RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 PGGT1BP53609 377 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 TBPL1P62380 186 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 ARG2P78540 354 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PRDX1Q06830 199 aaKnown RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 GBX1Q14549 363 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 CR1LQ2VPA4 569 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PRTGQ2VWP7 1150 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 MINDY4Q4G0A6 757 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 RBM20Q5T481 1227 aaKnown RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 FBXO42Q6P3S6 717 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 ISLR2Q6UXK2 745 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 Q6ZS92 163 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PRSS41Q7RTY9 318 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 PAQR7Q86WK9 346 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms