RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 AGRPO00253 132 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 ANKRD28O15084 1053 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 MED26O95402 600 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 CEACAM1P13688 526 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 GPX3P22352 226 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 ADSLP30566 484 aaPredicted RBP17.16■□□□□ 0.34
CLPX-203ENST00000558958 GCGRP47871 477 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 CLDN6P56747 220 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 SIM1P81133 766 aaPredicted RBP17.16■□□□□ 0.34
CLPX-203ENST00000558958 FOXM1Q08050 763 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 ZNF763Q0D2J5 394 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 FAM53BQ14153 422 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 PTGR1Q14914 329 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 NDUFA9Q16795 377 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 FAM91A1Q658Y4 838 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 TLDC1Q6P9B6 456 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 TRPM8Q7Z2W7 1104 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 FAM9CQ8IZT9 166 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 ZCCHC7Q8N3Z6 543 aaKnown RBP17.16■□□□□ 0.34
CLPX-203ENST00000558958 BMPERQ8N8U9 685 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 TTC29Q8NA56 475 aaPredicted RBP17.16■□□□□ 0.34
CLPX-203ENST00000558958 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLPX-203ENST00000558958 EGLN2Q96KS0 407 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 TSSK3Q96PN8 268 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 ACTL8Q9H568 366 aa17.16■□□□□ 0.34
CLPX-203ENST00000558958 A0A088AWK7 358 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 ARHGAP10A1A4S6 786 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 EFCAB7A8K855 629 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 PSMD12O00232 456 aaPredicted RBP17.15■□□□□ 0.34
CLPX-203ENST00000558958 SLC22A2O15244 555 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 HYAL3O43820 417 aaPredicted RBP17.15■□□□□ 0.34
CLPX-203ENST00000558958 TMPRSS11DO60235 418 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 GALR3O60755 368 aaPredicted RBP17.15■□□□□ 0.34
CLPX-203ENST00000558958 IL1RNP18510 177 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 ZNF10P21506 573 aaPredicted RBP17.15■□□□□ 0.34
CLPX-203ENST00000558958 CERS1P27544 350 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 MTTPP55157 894 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 NME5P56597 212 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 KLF10Q13118 480 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 MUM1Q2TAK8 710 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 FAM214AQ32MH5 1076 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 PAOXQ6QHF9 649 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 C6orf89Q6UWU4 347 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 PRSS41Q7RTY9 318 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 BPHLQ86WA6 291 aaPredicted RBP17.15■□□□□ 0.34
CLPX-203ENST00000558958 PDSS2Q86YH6 399 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 CLHC1Q8NHS4 586 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 C16orf78Q8WTQ4 265 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 SERINC2Q96SA4 455 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 STRADBQ9C0K7 418 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 COPS7BQ9H9Q2 264 aaPredicted RBP17.15■□□□□ 0.34
CLPX-203ENST00000558958 ZIM2Q9NZV7 527 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 RARRES3Q9UL19 164 aa17.15■□□□□ 0.34
CLPX-203ENST00000558958 CAPN14A8MX76 684 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 FOXS1O43638 330 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 CSO75390 466 aaKnown RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 ASMTP46597 345 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 MAPK12P53778 367 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 CLDN8P56748 225 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 UFM1P61960 85 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 SLAMF1Q13291 335 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 COL9A2Q14055 689 aaPredicted RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 IL11RAQ14626 422 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 HES3Q5TGS1 186 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 YOD1Q5VVQ6 348 aaPredicted RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 MRM1Q6IN84 353 aaKnown RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 CYB5D1Q6P9G0 228 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 RIPOR1Q6ZS17 1223 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 TREML1Q86YW5 311 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 OR9I1Q8NGQ6 314 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 PROKR1Q8TCW9 393 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 LIN37Q96GY3 246 aaPredicted RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 TEX37Q96LM6 180 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 DEPDC7Q96QD5 511 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 CMKLR1Q99788 373 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 ANKHQ9HCJ1 492 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 MYNNQ9NPC7 610 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 CUTCQ9NTM9 273 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 AKAP7Q9P0M2 348 aaPredicted RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 WBP11Q9Y2W2 641 aaKnown RBP17.14■□□□□ 0.33
CLPX-203ENST00000558958 NAALAD2Q9Y3Q0 740 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 CAPN7Q9Y6W3 813 aa17.14■□□□□ 0.33
CLPX-203ENST00000558958 CCT8L1PA6NM43 557 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 ZNF749O43361 778 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 SLC22A3O75751 556 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 FAM58BPP0C7Q3 252 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 FGF5P12034 268 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 CCL4P13236 92 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 JAK1P23458 1154 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 PIK3R1P27986 724 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 GSTM5P46439 218 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
CLPX-203ENST00000558958 TAS2R50P59544 299 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 TRA2BP62995 288 aaKnown RBP17.13■□□□□ 0.33
CLPX-203ENST00000558958 MC2RQ01718 297 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 PRAMEF17Q5VTA0 474 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 NIPAL1Q6NVV3 410 aa17.13■□□□□ 0.33
CLPX-203ENST00000558958 OR9A4Q8NGU2 314 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms