RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PRAMEF9Q5VWM5 478 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 IFT20Q8IY31 132 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 KRT78Q8N1N4 520 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 PLD6Q8N2A8 252 aaKnown RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 TCAIMQ8N3R3 496 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 CATSPER1Q8NEC5 780 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 TRPV3Q8NET8 790 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 NT5CQ8TCD5 201 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 ANKRD7Q92527 254 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 UBXN10Q96LJ8 280 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 PTCHD1Q96NR3 888 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 CD244Q9BZW8 370 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 EPS8L2Q9H6S3 715 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 ENAMQ9NRM1 1142 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 NUDT4Q9NZJ9 180 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 OPTCQ9UBM4 332 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 PTBP2Q9UKA9 531 aaKnown RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 RP1L1Q8IWN7 2480 aaPredicted RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 COL12A1Q99715 3063 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 A0A087WUV0 522 aaPredicted RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 EXOC1LA0A1B0GW35 172 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 TRIM49D1C9J1S8 452 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 RTCAO00442 366 aaKnown RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 KERAO60938 352 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 VPS4BO75351 444 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 ALDOAP04075 364 aaKnown RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 TUBB4AP04350 444 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 FHP07954 510 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 PRR35P0CG20 571 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 CD22P20273 847 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 MAOAP21397 527 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 AHRP35869 848 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 PIK3CGP48736 1102 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 OR4D2P58180 307 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 ARG2P78540 354 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 HIST2H2ACQ16777 129 aaPredicted RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 SFT2D3Q587I9 215 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 FAM219BQ5XKK7 198 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 KLC3Q6P597 504 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 RPS27LQ71UM5 84 aaKnown RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 CPEB2Q7Z5Q1 589 aaKnown RBP11.31□□□□□ -0.6
TPM1-216ENST00000558910 ANKRD37Q7Z713 158 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 CLNKQ7Z7G1 428 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 ATCAYQ86WG3 371 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 FAM47BQ8NA70 645 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 Q8NA96 180 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 PDPRQ8NCN5 879 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 CREB3L4Q8TEY5 395 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 SLC44A1Q8WWI5 657 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 TM9SF4Q92544 642 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 F2RL3Q96RI0 385 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 ATOH8Q96SQ7 321 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 TGIF2Q9GZN2 237 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.31□□□□□ -0.6
TPM1-216ENST00000558910 RIC8BQ9NVN3 520 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 ANKRD10Q9NXR5 420 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 SLC22A7Q9Y694 548 aa11.31□□□□□ -0.6
TPM1-216ENST00000558910 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 URADA6NGE7 173 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 SMIM23A6NLE4 172 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 IPO13O94829 963 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 SIX3O95343 332 aaPredicted RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 TGFB1P01137 390 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 EPORP19235 508 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 CERS1P27544 350 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 STXBP1P61764 594 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 ZNF33BQ06732 778 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 ILF2Q12905 390 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 MRPL49Q13405 166 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 PAPD4Q6PIY7 484 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 TMEM205Q6UW68 189 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 ISLR2Q6UXK2 745 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 TAOK1Q7L7X3 1001 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 LRRC70Q7Z2Q7 622 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 VN1R5Q7Z5H4 357 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 CUZD1Q86UP6 607 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 KLHDC8AQ8IYD2 350 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 AFAP1L2Q8N4X5 818 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 PNPLA2Q96AD5 504 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 MIB2Q96AX9 1013 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 TBC1D20Q96BZ9 403 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 PTCD3Q96EY7 689 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 SORBS1Q9BX66 1292 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 CAPS2Q9BXY5 557 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 REXO4Q9GZR2 422 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 ZNF700Q9H0M5 742 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 COPS7BQ9H9Q2 264 aaPredicted RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 KCNK13Q9HB14 408 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 PNO1Q9NRX1 252 aaKnown RBP11.3□□□□□ -0.6
TPM1-216ENST00000558910 LANCL2Q9NS86 450 aa11.3□□□□□ -0.6
TPM1-216ENST00000558910 ASF1BQ9NVP2 202 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms