RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 AGPAT4Q9NRZ5 378 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 OSGIN2Q9Y236 505 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 ACOT9Q9Y305 439 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 POLEQ07864 2286 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 LRIT2A6NDA9 550 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 URADA6NGE7 173 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 MAGEB17A8MXT2 336 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 POC1B-GALNT4F8VUJ3 575 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 SAP18O00422 153 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 RTCAO00442 366 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 TBX6O95947 436 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 ICAM2P13598 275 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 CERS1P27544 350 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 CRABP2P29373 138 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 GGT5P36269 586 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 MSH2P43246 934 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 KCNK10P57789 538 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 SLC26A5P58743 744 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 STXBP1P61764 594 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 DDX39BQ13838 428 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 ACER2Q5QJU3 275 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 PLAG1Q6DJT9 500 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 MYLK4Q86YV6 388 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 CENPLQ8N0S6 344 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 PLD6Q8N2A8 252 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 TEX9Q8N6V9 391 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 PDPRQ8NCN5 879 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 THAP3Q8WTV1 239 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 HAS2Q92819 552 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 OR1F2PQ96R84 312 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 ATOH8Q96SQ7 321 aa11.75□□□□□ -0.53
SMAD3-208ENST00000558827 SORBS1Q9BX66 1292 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 CDC42EP4Q9H3Q1 356 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 CPSF2Q9P2I0 782 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 MTRF1LQ9UGC7 380 aaKnown RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 ERRFI1Q9UJM3 462 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-208ENST00000558827 MYO7BQ6PIF6 2116 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 A0A096LPK6 155 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 TRAV17A0A0B4J275 112 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 OR5H15A6NDH6 313 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 TGFBR3LH3BV60 316 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 TGFB1P01137 390 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 IL10P22301 178 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 JAK1P23458 1154 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 COL8A1P27658 744 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 TYK2P29597 1187 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 SKP1P63208 163 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 ID2Q02363 134 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 OC90Q02509 493 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-208ENST00000558827 PFKFB4Q16877 469 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 FAM219BQ5XKK7 198 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 M1APQ8TC57 530 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 DOK4Q8TEW6 326 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 SSC4DQ8WTU2 575 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 FAR1Q8WVX9 515 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 GAL3ST3Q96A11 431 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 PTCD3Q96EY7 689 aaKnown RBP11.74□□□□□ -0.53
SMAD3-208ENST00000558827 QRFPRQ96P65 431 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 SIGLEC12Q96PQ1 595 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 PSMG3-AS1Q96PY0 264 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 CSF3RQ99062 836 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 CAPS2Q9BXY5 557 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 PHACTR1Q9C0D0 580 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 REXO4Q9GZR2 422 aaKnown RBP11.74□□□□□ -0.53
SMAD3-208ENST00000558827 LIN28AQ9H9Z2 209 aaKnown RBP11.74□□□□□ -0.53
SMAD3-208ENST00000558827 PRTFDC1Q9NRG1 225 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 GPRC5BQ9NZH0 403 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 NUDT4Q9NZJ9 180 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 OPTCQ9UBM4 332 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 ANGPTL3Q9Y5C1 460 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 CPAMD8Q8IZJ3 1885 aa11.74□□□□□ -0.53
SMAD3-208ENST00000558827 K7EPI3 171 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 E2F3O00716 465 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 PCDH17O14917 1159 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 MAST4O15021 2626 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 B3GALT2O43825 422 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 KERAO60938 352 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 CLEC3AO75596 197 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 SIX3O95343 332 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-208ENST00000558827 MTHFD2P13995 350 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 GFAPP14136 432 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 MST1P26927 711 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 PHBP35232 272 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 CD96P40200 585 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 PIK3CGP48736 1102 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 SLC13A2Q13183 592 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 NAB1Q13506 487 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 EXT1Q16394 746 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 HIST2H2ACQ16777 129 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-208ENST00000558827 ZNF468Q5VIY5 522 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-208ENST00000558827 HIST2H2AA3Q6FI13 130 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 SPINK14Q6IE38 97 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 C16orf47Q6ZP98 133 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms