RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 MAGEB17A8MXT2 336 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 PRMT3O60678 531 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 MAOAP21397 527 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 GSTM2P28161 218 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 SOX11P35716 441 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 SERPINB9P50453 376 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 ST13P50502 369 aaKnown RBP14.39□□□□□ -0.11
RPL28-207ENST00000558815 AP2B1P63010 937 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 MRPL49Q13405 166 aaKnown RBP14.39□□□□□ -0.11
RPL28-207ENST00000558815 DDX39BQ13838 428 aaKnown RBP14.39□□□□□ -0.11
RPL28-207ENST00000558815 ZNF169Q14929 603 aaPredicted RBP14.39□□□□□ -0.11
RPL28-207ENST00000558815 ACAP2Q15057 778 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 ABHD17BQ5VST6 288 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 TRIM40Q6P9F5 258 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 PLD6Q8N2A8 252 aaKnown RBP14.39□□□□□ -0.11
RPL28-207ENST00000558815 GALNT11Q8NCW6 608 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 OR1N1Q8NGS0 311 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 UBTD2Q8WUN7 234 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 F2RL3Q96RI0 385 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 LPAR4Q99677 370 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 FUT8Q9BYC5 575 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 REXO4Q9GZR2 422 aaKnown RBP14.39□□□□□ -0.11
RPL28-207ENST00000558815 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.39□□□□□ -0.11
RPL28-207ENST00000558815 NTNG1Q9Y2I2 539 aa14.39□□□□□ -0.11
RPL28-207ENST00000558815 A0A088AWK7 358 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 EXOC1LA0A1B0GW35 172 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 TCP11X1B4DZS4 312 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 TRIM49D1C9J1S8 452 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 B3GALT2O43825 422 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 KRT38O76015 456 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 MTHFD2P13995 350 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 EPB42P16452 691 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 ZNF10P21506 573 aaPredicted RBP14.38□□□□□ -0.11
RPL28-207ENST00000558815 CERS1P27544 350 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 ARL1P40616 181 aaPredicted RBP14.38□□□□□ -0.11
RPL28-207ENST00000558815 RUNX2Q13950 521 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 SETDB1Q15047 1291 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 TLR1Q15399 786 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 NR6A1Q15406 480 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 TECRLQ5HYJ1 363 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 PLAG1Q6DJT9 500 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 MED27Q6P2C8 311 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 GSPT2Q8IYD1 628 aaKnown RBP14.38□□□□□ -0.11
RPL28-207ENST00000558815 FAM47BQ8NA70 645 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 LRRN4CLQ8ND94 238 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 OR2L5Q8NG80 312 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 RHEBL1Q8TAI7 183 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 WDR34Q96EX3 536 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 PITHD1Q9GZP4 211 aaPredicted RBP14.38□□□□□ -0.11
RPL28-207ENST00000558815 NECTIN3Q9NQS3 549 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 COPG2Q9UBF2 871 aa14.38□□□□□ -0.11
RPL28-207ENST00000558815 SIX3O95343 332 aaPredicted RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 WDPCPO95876 746 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 TBX6O95947 436 aaPredicted RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 TGFB1P01137 390 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 HPDP32754 393 aaPredicted RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 ALDH18A1P54886 795 aaKnown RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 TGM3Q08188 693 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 UBAP2LQ14157 1087 aaKnown RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 TBCCQ15814 346 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 EXT1Q16394 746 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 QSOX2Q6ZRP7 698 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 RNF175Q8N4F7 328 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 PTGR2Q8N8N7 351 aaPredicted RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 DCAKDQ8WVC6 231 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 GPR78Q96P69 363 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 ACTR8Q9H981 624 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 CLK4Q9HAZ1 481 aaKnown RBP14.37□□□□□ -0.11
RPL28-207ENST00000558815 PRDM9Q9NQV7 894 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 STMN3Q9NZ72 180 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 TEKT2Q9UIF3 430 aa14.37□□□□□ -0.11
RPL28-207ENST00000558815 SAP18O00422 153 aaKnown RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 FAM153BP0C7A2 387 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 TSFMP43897 325 aaKnown RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 MTTPP55157 894 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 RAB38P57729 211 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 SLC26A5P58743 744 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 SLC13A2Q13183 592 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 EIF2S3LQ2VIR3 472 aaKnown RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 FAM153CQ494X1 144 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 ABHD17CQ6PCB6 329 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 CLNKQ7Z7G1 428 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 CRLF3Q8IUI8 442 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 KIF2BQ8N4N8 673 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 ARMC2Q8NEN0 867 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 OR7G3Q8NG95 312 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 PRR7Q8TB68 274 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 GRHL3Q8TE85 626 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 ZNF473Q8WTR7 871 aaKnown RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 UBE2E3Q969T4 207 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 PHF21BQ96EK2 531 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 QRFPRQ96P65 431 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 SERINC2Q96SA4 455 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 CSF3RQ99062 836 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 NPLQ9BXD5 320 aaPredicted RBP14.36□□□□□ -0.11
RPL28-207ENST00000558815 MS4A8Q9BY19 250 aa14.36□□□□□ -0.11
RPL28-207ENST00000558815 PRTFDC1Q9NRG1 225 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms