RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 AGR3Q8TD06 166 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 FKBP10Q96AY3 582 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 CCNL2Q96S94 520 aaPredicted RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 ZNF395Q9H8N7 513 aaPredicted RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 COPS7BQ9H9Q2 264 aaPredicted RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 TRPC4Q9UBN4 977 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 FARSAQ9Y285 508 aaKnown RBP16.52■□□□□ 0.24
TPM1-214ENST00000558544 MAP4K5Q9Y4K4 846 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 ZZEF1O43149 2961 aa16.52■□□□□ 0.24
TPM1-214ENST00000558544 TMEM114B3SHH9 223 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 TMEM233B4DJY2 109 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 AZIN1O14977 448 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 DNAJB6O75190 326 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ULK1O75385 1050 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 HSPA4LO95757 839 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 UROSP10746 265 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 CHN1P15882 459 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 WT1P19544 449 aaPredicted RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 CERS1P27544 350 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ABCE1P61221 599 aaKnown RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 TLE3Q04726 772 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ABRAXAS2Q15018 415 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SH2D4BQ5SQS7 431 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 NIPAL1Q6NVV3 410 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SCIMPQ6UWF3 145 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 TMEM151BQ8IW70 566 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SRFBP1Q8NEF9 429 aaKnown RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 QRFPRQ96P65 431 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 KCNC2Q96PR1 638 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SERPINI1Q99574 410 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 CENPKQ9BS16 269 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 EFHD1Q9BUP0 239 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SORBS1Q9BX66 1292 aaKnown RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 ACTL8Q9H568 366 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PSD3Q9NYI0 1048 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ZNF282Q9UDV7 671 aaPredicted RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 KCND3Q9UK17 655 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PPT2Q9UMR5 302 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PCDHGA6Q9Y5G7 932 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 A0A087WV48 116 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 A0A088AWK7 358 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PLPP1O14494 284 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ALBP02768 609 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 NR1D1P20393 614 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ZNF10P21506 573 aaPredicted RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 GRK2P25098 689 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PTPN4P29074 926 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SSR2P43308 183 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SLC1A6P48664 564 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 OCA2Q04671 838 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 BST1Q10588 318 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 STX3Q13277 289 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 CUL3Q13618 768 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 NKG7Q16617 165 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 HSP90B2PQ58FF3 399 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 VWA2Q5GFL6 755 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 BROXQ5VW32 411 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 KANK2Q63ZY3 851 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ZNF793Q6ZN11 406 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SHISA6Q6ZSJ9 500 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PRSS58Q8IYP2 241 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 OR51Q1Q8NH59 317 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 STARD8Q92502 1023 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 RGMAQ96B86 450 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 TBCDQ9BTW9 1192 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 GPR87Q9BY21 358 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 RBCK1Q9BYM8 510 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 C20orf27Q9GZN8 174 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SLC26A1Q9H2B4 701 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SOX17Q9H6I2 414 aaPredicted RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 BRF2Q9HAW0 419 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 MKKSQ9NPJ1 570 aaPredicted RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 PRDM7Q9NQW5 492 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 ZDHHC2Q9UIJ5 367 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 TCFL5Q9UL49 500 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PADI2Q9Y2J8 665 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 SSUH2Q9Y2M2 353 aa16.51■□□□□ 0.23
TPM1-214ENST00000558544 PTRH2Q9Y3E5 179 aaKnown RBP16.51■□□□□ 0.23
TPM1-214ENST00000558544 B3GALT2O43825 422 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 HSD3B1P14060 373 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 HSD3B2P26439 372 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 XCR1P46094 333 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 MTTPP55157 894 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 AP5B1Q2VPB7 878 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 ZC3H7AQ8IWR0 971 aaKnown RBP16.5■□□□□ 0.23
TPM1-214ENST00000558544 STT3BQ8TCJ2 826 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 MIEF2Q96C03 454 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 PEX11GQ96HA9 241 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 SLC45A3Q96JT2 553 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 SERINC2Q96SA4 455 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 SPSB2Q99619 263 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 MRPL1Q9BYD6 325 aaKnown RBP16.5■□□□□ 0.23
TPM1-214ENST00000558544 ACPTQ9BZG2 426 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 TRAF6Q9Y4K3 522 aa16.5■□□□□ 0.23
TPM1-214ENST00000558544 IGLV3-12A0A075B6K2 115 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 VSTM2BA6NLU5 285 aa16.49■□□□□ 0.23
TPM1-214ENST00000558544 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
TPM1-214ENST00000558544 EFSO43281 561 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms