RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PPP1R3AQ16821 1122 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 UGT3A2Q3SY77 523 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 CDKL4Q5MAI5 379 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 BORAQ6PGQ7 559 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 AMIGO1Q86WK6 493 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 CARFQ8N187 725 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 PACRGLQ8N7B6 248 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 ASB11Q8WXH4 323 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 ZNF501Q96CX3 271 aaPredicted RBP9.85□□□□□ -0.83
TPM1-212ENST00000558347 DGCR14Q96DF8 476 aaKnown RBP9.85□□□□□ -0.83
TPM1-212ENST00000558347 DTNBP1Q96EV8 351 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 ZNF597Q96LX8 424 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 OSBPL11Q9BXB4 747 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 KLHL25Q9H0H3 589 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 MUC13Q9H3R2 512 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 LHX9Q9NQ69 397 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 C8orf4Q9NR00 106 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 C1GALT1Q9NS00 363 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 ARMC1Q9NVT9 282 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 SOHLH2Q9NX45 425 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 RNF112Q9ULX5 631 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 ICKQ9UPZ9 632 aa9.85□□□□□ -0.83
TPM1-212ENST00000558347 AQP12BA6NM10 295 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 B8ZZF3 427 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 STX16-NPEPL1H3BU86 382 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 UBFD1O14562 309 aaKnown RBP9.84□□□□□ -0.83
TPM1-212ENST00000558347 STX16O14662 325 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 AZIN1O14977 448 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 SUPT7LO94864 414 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 CLPTM1O96005 669 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 FURINP09958 794 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PVRP15151 417 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 ST6GAL1P15907 406 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 ZNF26P17031 533 aaPredicted RBP9.84□□□□□ -0.83
TPM1-212ENST00000558347 TCN2P20062 427 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 GPX3P22352 226 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 CDKL1Q00532 357 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 NFATC3Q12968 1075 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 BNIP2Q12982 314 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 APOFQ13790 326 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 TGFBIQ15582 683 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 SYTL3Q4VX76 610 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 TMTC4Q5T4D3 741 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PRAMEF17Q5VTA0 474 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 KANK2Q63ZY3 851 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 FAM199XQ6PEV8 388 aaPredicted RBP9.84□□□□□ -0.83
TPM1-212ENST00000558347 SPATA19Q7Z5L4 167 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 BPHLQ86WA6 291 aaPredicted RBP9.84□□□□□ -0.83
TPM1-212ENST00000558347 GPSM1Q86YR5 675 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 VRK3Q8IV63 474 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 AQP12AQ8IXF9 295 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 TBC1D21Q8IYX1 336 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 ANKFN1Q8N957 763 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 SLC38A9Q8NBW4 561 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 OR5K2Q8NHB8 316 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 CT55Q8WUE5 264 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PHF21BQ96EK2 531 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 FCRL4Q96PJ5 515 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 GPATCH1Q9BRR8 931 aaKnown RBP9.84□□□□□ -0.83
TPM1-212ENST00000558347 C1QTNF3Q9BXJ4 246 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 TNFRSF12AQ9NP84 129 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PFDN4Q9NQP4 134 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 STARD5Q9NSY2 213 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 ACTR10Q9NZ32 417 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PTTG2Q9NZH5 202 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 NUDT4Q9NZJ9 180 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 ABCD2Q9UBJ2 740 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PACSIN3Q9UKS6 424 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 PADI1Q9ULC6 663 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 ASF1AQ9Y294 204 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 OARD1Q9Y530 152 aa9.84□□□□□ -0.83
TPM1-212ENST00000558347 TLN1Q9Y490 2541 aaKnown RBP9.83□□□□□ -0.84
TPM1-212ENST00000558347 C2orf74A8MZ97 194 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 SUPT3HB4E1H0 165 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 UBXN8O00124 270 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 KATNA1O75449 491 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 PSIP1O75475 530 aaKnown RBP9.83□□□□□ -0.84
TPM1-212ENST00000558347 SUPT3HO75486 399 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 SCRG1O75711 98 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 CCNYL3P0C7X3 344 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 HSD17B1P14061 328 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 ABRQ12979 859 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 DNASE1L3Q13609 305 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 DEFB109BQ30KR1 87 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 IL23RQ5VWK5 629 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 AP1ARQ63HQ0 302 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 OGFOD2Q6N063 350 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 PAOXQ6QHF9 649 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 TRIM73Q86UV7 250 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 CHERPQ8IWX8 916 aaKnown RBP9.83□□□□□ -0.84
TPM1-212ENST00000558347 MIER2Q8N344 545 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 PTGR2Q8N8N7 351 aaPredicted RBP9.83□□□□□ -0.84
TPM1-212ENST00000558347 PDPRQ8NCN5 879 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 FBXO15Q8NCQ5 510 aaPredicted RBP9.83□□□□□ -0.84
TPM1-212ENST00000558347 FLVCR1-AS1Q8TAF5 88 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 ATP6V1E2Q96A05 226 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 EME1Q96AY2 570 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 HAUS8Q9BT25 410 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 GID8Q9NWU2 228 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 SPHK1Q9NYA1 384 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms