RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 SLC6A15Q9H2J7 730 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 ARNT2Q9HBZ2 717 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 SEMA4BQ9NPR2 832 aaPredicted RBP8.65□□□□□ -1.02
PABPN1-208ENST00000557702 KLHL28Q9NXS3 571 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 MYOTQ9UBF9 498 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 LCMT1Q9UIC8 334 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 RUVBL2Q9Y230 463 aaKnown RBP8.65□□□□□ -1.02
PABPN1-208ENST00000557702 ZNF281Q9Y2X9 895 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 ATG4BQ9Y4P1 393 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 SLC22A7Q9Y694 548 aa8.65□□□□□ -1.02
PABPN1-208ENST00000557702 ZNF839A8K0R7 811 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 WWP2O00308 870 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 PRKNO60260 465 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ERGP11308 486 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 PECAM1P16284 738 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 SRD5A1P18405 259 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 FOXN2P32314 431 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 HSD17B2P37059 387 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 DIO3P55073 304 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ARHGAP19Q14CB8 494 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 HERC3Q15034 1050 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 TERF2Q15554 542 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 P3H1Q32P28 736 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ANKRD20A4Q4UJ75 823 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ANKRD20A2Q5SQ80 823 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ANKRD20A1Q5TYW2 823 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ANKRD20A3Q5VUR7 823 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 E4F1Q66K89 784 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 KCT2Q8NC54 265 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 FBXO15Q8NCQ5 510 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 NCLNQ969V3 563 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 THAP11Q96EK4 314 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 TRMT61AQ96FX7 289 aaKnown RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 MRFAP1L1Q96HT8 127 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 DOCK7Q96N67 2140 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 TIMP4Q99727 224 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 PIGQQ9BRB3 760 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 MED18Q9BUE0 208 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 SFXN3Q9BWM7 321 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ZNF703Q9H7S9 590 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 CALHM2Q9HA72 323 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 NECTIN3Q9NQS3 549 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 QPCTLQ9NXS2 382 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 CTTNBP2NLQ9P2B4 639 aa8.64□□□□□ -1.03
PABPN1-208ENST00000557702 LIMA1Q9UHB6 759 aaKnown RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 ZNF223Q9UK11 482 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 BOKQ9UMX3 212 aaPredicted RBP8.64□□□□□ -1.03
PABPN1-208ENST00000557702 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 IGKV3D-11A0A0A0MRZ8 115 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CCDC162PA2VCL2 907 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 LRRC10BA6NIK2 292 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 HACD1B0YJ81 288 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SNPHO15079 494 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 KPNA5O15131 536 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CHST10O43529 356 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CST8O60676 142 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 KRT1P04264 644 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CCL3P10147 92 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 HRH2P25021 359 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PSMB4P28070 264 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CPOXP36551 454 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PPARGP37231 505 aaPredicted RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PNLIPRP1P54315 467 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SKP1P63208 163 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CRYZQ08257 329 aaKnown RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 FOXF2Q12947 444 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 DUSP8Q13202 625 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 TFDP2Q14188 446 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SPARCL1Q14515 664 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 POU6F1Q14863 301 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 HECTD2Q5U5R9 776 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SYDE1Q6ZW31 735 aaPredicted RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 MEX3DQ86XN8 651 aaKnown RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 C9orf106Q8NAJ2 232 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SLC22A8Q8TCC7 542 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SLC13A3Q8WWT9 602 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 TM4SF19Q96DZ7 209 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 QRFPRQ96P65 431 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 QKIQ96PU8 341 aaKnown RBP eCLIP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PANX3Q96QZ0 392 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PANX2Q96RD6 677 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SLC30A3Q99726 388 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 FERMT1Q9BQL6 677 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 ANGPTL4Q9BY76 406 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 FAM129AQ9BZQ8 928 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PRDM14Q9GZV8 571 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PIGMQ9H3S5 423 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 SH2D2AQ9NP31 389 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PNO1Q9NRX1 252 aaKnown RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 ABCF3Q9NUQ8 709 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 TMEM184CQ9NVA4 438 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 UVRAGQ9P2Y5 699 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 PPIEQ9UNP9 301 aaKnown RBP8.63□□□□□ -1.03
PABPN1-208ENST00000557702 CAMK2AQ9UQM7 478 aa8.63□□□□□ -1.03
PABPN1-208ENST00000557702 FREM3P0C091 2139 aa8.62□□□□□ -1.03
PABPN1-208ENST00000557702 A8MXE2 369 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms