RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 OR2A14Q96R47 310 aa15.63■□□□□ 0.09
SHMT2-232ENST00000557487 N6AMT1Q9Y5N5 214 aa15.63■□□□□ 0.09
SHMT2-232ENST00000557487 ARHGAP33O14559 1287 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 PCDH7O60245 1069 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 CD22P20273 847 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 AQP1P29972 269 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 TNFSF8P32971 234 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 CRATP43155 626 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 RORCP51449 518 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 MVDP53602 400 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 SNRPGP62308 76 aaKnown RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 RAE1P78406 368 aaKnown RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 VEPH1Q14D04 833 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 PTGES3Q15185 160 aaKnown RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 MED22Q15528 200 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ATAD3CQ5T2N8 411 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 MPP7Q5T2T1 576 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 Q6ZNB5 142 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 IL17RCQ8NAC3 791 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 MAL2Q969L2 176 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 RMI1Q9H9A7 625 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 FZD3Q9NPG1 666 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 RLIMQ9NVW2 624 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 FTSJ1Q9UET6 329 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 TMEM98Q9Y2Y6 226 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ZNF451Q9Y4E5 1061 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ENPP4Q9Y6X5 453 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 CENPXA8MT69 81 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 A8MU76 341 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 FADS2P1A8MWK0 482 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 H3BQ06 376 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 SLCO2B1O94956 709 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 CSTF2P33240 577 aaKnown RBP eCLIP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 NKX2-5P52952 324 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 CRISP1P54107 249 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 E2F2Q14209 437 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ZFP69Q49AA0 526 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ZNF517Q6ZMY9 492 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 PTCHD4Q6ZW05 846 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 APCDD1Q8J025 514 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 NLGN4XQ8N0W4 816 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 WDR36Q8NI36 951 aaKnown RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 FAM129BQ96TA1 746 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 MTERF1Q99551 399 aaKnown RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ATG10Q9H0Y0 220 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ABCG8Q9H221 673 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 REEP4Q9H6H4 257 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 RNF167Q9H6Y7 350 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 SGK2Q9HBY8 427 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 TRPV5Q9NQA5 729 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ACER3Q9NUN7 267 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 TAS2R9Q9NYW1 312 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 NDOR1Q9UHB4 597 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 TBC1D24Q9ULP9 559 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 ANGPT4Q9Y264 503 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 CAB39Q9Y376 341 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-232ENST00000557487 BRCA2P51587 3418 aa15.62■□□□□ 0.09
SHMT2-232ENST00000557487 IQCMA0A1B0GVH7 501 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 C2orf78A6NCI8 922 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 HMX3A6NHT5 357 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 SCO2O43819 266 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 GADD45GO95257 159 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 OR1D2P34982 312 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 PTSQ03393 145 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 EEF1A2Q05639 463 aaKnown RBP15.61■□□□□ 0.09
SHMT2-232ENST00000557487 RUNX1T1Q06455 604 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 NCF4Q15080 339 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 BCL7AQ4VC05 210 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 SOWAHCQ53LP3 525 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-232ENST00000557487 TMEM201Q5SNT2 666 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 ARMC4Q5T2S8 1044 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 TPGS2Q68CL5 300 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 ERAP2Q6P179 960 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 TMPRSS11AQ6ZMR5 421 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 VRK3Q8IV63 474 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 BBS7Q8IWZ6 715 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 OR8H2Q8N162 312 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 TCF25Q9BQ70 676 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 ASPNQ9BXN1 380 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 CPEB1Q9BZB8 566 aaKnown RBP15.61■□□□□ 0.09
SHMT2-232ENST00000557487 BRD9Q9H8M2 597 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 STARD7Q9NQZ5 370 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 NOX1Q9Y5S8 564 aa15.61■□□□□ 0.09
SHMT2-232ENST00000557487 CTDSP2O14595 271 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 ADAM12O43184 909 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 PSIP1O75475 530 aaKnown RBP15.6■□□□□ 0.09
SHMT2-232ENST00000557487 ADAP00813 363 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 MAGP20916 626 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 PSMA1P25786 263 aaKnown RBP15.6■□□□□ 0.09
SHMT2-232ENST00000557487 SPINT3P49223 89 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 CDK6Q00534 326 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 SSX1Q16384 188 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 FRMPD2BQ6IN97 320 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 UNC5DQ6UXZ4 953 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 ASCC1Q8N9N2 400 aaKnown RBP15.6■□□□□ 0.09
SHMT2-232ENST00000557487 FAM181AQ8N9Y4 354 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 OR9Q1Q8NGQ5 310 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 WFDC5Q8TCV5 224 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 TIFAQ96CG3 184 aa15.6■□□□□ 0.09
SHMT2-232ENST00000557487 MTERF3Q96E29 417 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms