RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PTPRDP23468 1912 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 NUP205Q92621 2012 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 C5orf42Q9H799 3197 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 PNMA8CA0A1B0GUJ8 204 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 LOC100130705A0A1B0GUX0 176 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TRIM64BA6NI03 449 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 NCF1BA6NI72 391 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 A8MVJ9 347 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 NCF1CA8MVU1 366 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CLDN25C9JDP6 229 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RFXANKO14593 260 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ACOX3O15254 700 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TPST1O60507 370 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CLPXO76031 633 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SEC14L2O76054 403 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SEC24DO94855 1032 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 OR6B1O95007 311 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 EPN2O95208 641 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SLC25A14O95258 325 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TRBC1P01850 177 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 G6PDP11413 515 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CYP2A6P11509 494 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 NCF1P14598 390 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CTPS1P17812 591 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 IL12AP29459 219 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 KRT20P35900 424 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 HNF4AP41235 474 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RECQLP46063 649 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 GSTM5P46439 218 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 C21orf58P58505 322 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ERVPABLB-1P60509 514 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 COPZ1P61923 177 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RPS14P62263 151 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RIPPLY1Q0D2K3 151 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 BOP1Q14137 746 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CAPRIN1Q14444 709 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RAB39AQ14964 217 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TEAD2Q15562 447 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 HIST2H2ACQ16777 129 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TIMM50Q3ZCQ8 353 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 FBXO43Q4G163 708 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SLC44A4Q53GD3 710 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ARHGAP15Q53QZ3 475 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RUNDC3AQ59EK9 446 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 C6orf141Q5SZD1 244 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 LRIF1Q5T3J3 769 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SDHAF4Q5VUM1 108 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 HIST2H2AA3Q6FI13 130 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TANGO2Q6ICL3 276 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SHQ1Q6PI26 577 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 PARM1Q6UWI2 310 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 DLEU7Q6UYE1 221 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 Q6ZSR9 355 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 MTSS1LQ765P7 747 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 R3HCC1LQ7Z5L2 792 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 LDB1Q86U70 411 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SERPINA9Q86WD7 417 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 HORMAD1Q86X24 394 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CPNE9Q8IYJ1 553 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 KIAA2013Q8IYS2 634 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TTC9BQ8N6N2 239 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SIDT2Q8NBJ9 832 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 MDGA1Q8NFP4 955 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 OR13F1Q8NGS4 319 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 HCAR2Q8TDS4 363 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ASZ1Q8WWH4 475 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 FIG4Q92562 907 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 MRPS31Q92665 395 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 USP7Q93009 1102 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 MYDGFQ969H8 173 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 UBE2E3Q969T4 207 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TMBIM1Q969X1 311 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 PPP1R16AQ96I34 528 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 LRIG1Q96JA1 1093 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ZSWIM3Q96MP5 696 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ACOX2Q99424 681 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RPP25Q9BUL9 199 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CPEB1Q9BZB8 566 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 UNKQ9C0B0 810 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 PAIP1Q9H074 479 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TUBB1Q9H4B7 451 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 CLMPQ9H6B4 373 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 REEP1Q9H902 201 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 BRF2Q9HAW0 419 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ZFP14Q9HCL3 533 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SPATA6Q9NWH7 488 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 FAM118AQ9NWS6 357 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ARL15Q9NXU5 204 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 KIF17Q9P2E2 1029 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 MYOTQ9UBF9 498 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 EIF2B4Q9UI10 523 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SLC25A13Q9UJS0 675 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 RUVBL1Q9Y265 456 aaKnown RBP5.89□□□□□ -1.47
CPSF2-205ENST00000556622 SH3GLB1Q9Y371 365 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 TIMM22Q9Y584 194 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 A3GALT2U3KPV4 340 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 PMF1-BGLAPU3KQ54 211 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 ANKRD36A6QL64 1941 aa5.89□□□□□ -1.47
CPSF2-205ENST00000556622 DOCK4Q8N1I0 1966 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms