RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ZNF732B4DXR9 585 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 KBTBD13C9JR72 458 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 IFIT3O14879 490 aaKnown RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 SCO2O43819 266 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 SUPT20HL2P0C7V6 817 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 PCP11498 1178 aaKnown RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 PGFP49763 221 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 BFSP1Q12934 665 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 SCARB2Q14108 478 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 MAPK11Q15759 364 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 MLF2Q15773 248 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 ARMCX4Q5H9R4 360 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 CDHR3Q6ZTQ4 885 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 GALNTL5Q7Z4T8 443 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 OR2L2Q8NH16 312 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 PDLIM5Q96HC4 596 aaKnown RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 ATF6BQ99941 703 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 CITED2Q99967 270 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 ADPGKQ9BRR6 497 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 LSG1Q9H089 658 aaKnown RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 C3orf14Q9HBI5 128 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 SLCO1C1Q9NYB5 712 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 TMOD3Q9NYL9 352 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 DNAJB9Q9UBS3 223 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 DBF4Q9UBU7 674 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-221ENST00000556534 GPR132Q9UNW8 380 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 ZHX2Q9Y6X8 837 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 PFASO15067 1338 aa3.66□□□□□ -1.82
SCFD1-221ENST00000556534 IQCMA0A1B0GVH7 501 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ANKDD1BA6NHY2 528 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ARHGEF33A8MVX0 844 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 CTDSPLO15194 276 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ZNF749O43361 778 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ANGPTL1O95841 491 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 IER3P46695 156 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 KCNJ1P48048 391 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 NPBWR1P48145 328 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ATP4BP51164 291 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 EVCP57679 992 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 FCHO2Q0JRZ9 810 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 CNTN1Q12860 1018 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 FAM182AQ5T1J6 154 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ZNF774Q6NX45 483 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 SLC27A4Q6P1M0 643 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 CASC4Q6P4E1 433 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 NHLRC1Q6VVB1 395 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ZNF841Q6ZN19 808 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 C17orf107Q6ZR85 190 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ANKRD46Q86W74 232 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 RNF130Q86XS8 419 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 ERC1Q8IUD2 1116 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 SIX6OS1Q8N1H7 587 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 NHLRC2Q8NBF2 726 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 CHCHD5Q9BSY4 110 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 CCDC28BQ9BUN5 200 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 OCR1Q9BZK8 76 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 HEXA-AS1Q9H8Q6 139 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 MRPL17Q9NRX2 175 aaKnown RBP3.65□□□□□ -1.83
SCFD1-221ENST00000556534 PDRG1Q9NUG6 133 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 GTSE1Q9NYZ3 720 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 UBQLN2Q9UHD9 624 aa3.65□□□□□ -1.83
SCFD1-221ENST00000556534 FAM170AA1A519 330 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 ANHXE9PGG2 379 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 K7EQG2 157 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 SRSF10O75494 262 aaKnown RBP3.64□□□□□ -1.83
SCFD1-221ENST00000556534 FOLR2P14207 255 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 CCND3P30281 292 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-221ENST00000556534 SOAT1P35610 550 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 NDUFV3P56181 108 aaKnown RBP3.64□□□□□ -1.83
SCFD1-221ENST00000556534 CETN1Q12798 172 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 RIGQ13278 110 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 GCKRQ14397 625 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 PM20D1Q6GTS8 502 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 PODNL1Q6PEZ8 512 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 MSANTD1Q6ZTZ1 278 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 KCNMB4Q86W47 210 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 TMEM99Q8N816 258 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 SMYD1Q8NB12 490 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 SPATA17Q96L03 361 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 RASL10BQ96S79 203 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 DESI2Q9BSY9 194 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 SLC39A8Q9C0K1 460 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 GPR173Q9NS66 373 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 GMEB2Q9UKD1 530 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 CDH7Q9ULB5 785 aa3.64□□□□□ -1.83
SCFD1-221ENST00000556534 C2orf92A0A1B0GVN3 265 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 ADORA3P0DMS8 318 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 MUTP22033 750 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 FCGR2BP31994 310 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-221ENST00000556534 FCGR2CP31995 323 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SLC1A3P43003 542 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 PTGER3P43115 390 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 PRELPP51888 382 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 CRYBA2P53672 197 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 BACE1P56817 501 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SRPXP78539 464 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms