RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TMCO1Q9UM00 188 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 TNPO3Q9Y5L0 923 aaKnown RBP10.88□□□□□ -0.67
SLIRP-205ENST00000556310 A0A088AWK7 358 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 LRIT2A6NDA9 550 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 CHST10O43529 356 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF500O60304 480 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 TBX6O95947 436 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 RNH1P13489 461 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF10P21506 573 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 SERPINB1P30740 379 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 HNRNPH1P31943 449 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 PIK3CGP48736 1102 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 AP2B1P63010 937 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 OLR1P78380 273 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 RHAGQ02094 409 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 Q0VFX4 171 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 SLC29A2Q14542 456 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 NADK2Q4G0N4 442 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 ADNP2Q6IQ32 1131 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 GRHL2Q6ISB3 625 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 TIFABQ6ZNK6 161 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 RIPOR1Q6ZS17 1223 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 LANCL3Q6ZV70 420 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 KBTBD2Q8IY47 623 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 LAS2Q8IYD9 372 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 TEX9Q8N6V9 391 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 RBMXL3Q8N7X1 1067 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 PTGR2Q8N8N7 351 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 OR2L5Q8NG80 312 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 THOC3Q96J01 351 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 FAR2Q96K12 515 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 SCYL1Q96KG9 808 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 MRPL57Q9BQC6 102 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 TUBB6Q9BUF5 446 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 TRIM4Q9C037 500 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 REXO4Q9GZR2 422 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 MRPL46Q9H2W6 279 aaKnown RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF490Q9ULM2 529 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-205ENST00000556310 ANGPTL3Q9Y5C1 460 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 FLNCQ14315 2725 aa10.87□□□□□ -0.67
SLIRP-205ENST00000556310 IQANK1A0A1B0GTG1 560 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 STX16-NPEPL1H3BU86 382 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 PSMD12O00232 456 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 E2F3O00716 465 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 STX16O14662 325 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 UGDHO60701 494 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 CDC123O75794 336 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 SORBS2O94875 1100 aaKnown RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 SIX3O95343 332 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 SERPINA7P05543 415 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 PRR35P0CG20 571 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 BTN3A2P78410 334 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 TGM3Q08188 693 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 GTF2H2Q13888 395 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 ABRAXAS2Q15018 415 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 COLEC12Q5KU26 742 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 AGAP7PQ5VUJ5 663 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 SLC6A19Q695T7 634 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 JMJD6Q6NYC1 403 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 GTF2H2CQ6P1K8 395 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 MED27Q6P2C8 311 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 TRIM40Q6P9F5 258 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 IGFL2Q6UWQ7 119 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 QSOX2Q6ZRP7 698 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 CPEB2Q7Z5Q1 589 aaKnown RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 LCA5Q86VQ0 697 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF473Q8WTR7 871 aaKnown RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 PNPLA2Q96AD5 504 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 IMMP1LQ96LU5 166 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 AGAP4Q96P64 663 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 QRFPRQ96P65 431 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 CCDC77Q9BR77 488 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 NPLQ9BXD5 320 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 MS4A8Q9BY19 250 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 ANKZF1Q9H8Y5 726 aa10.86□□□□□ -0.67
SLIRP-205ENST00000556310 RP1L1Q8IWN7 2480 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-205ENST00000556310 SHANK1Q9Y566 2161 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 A0A0G2JN53 185 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 OR2W5A6NFC9 320 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 LRRC14BA6NHZ5 514 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 B3GALT2O43825 422 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 DNAJB6O75190 326 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 SMIM24O75264 130 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 SEC24DO94855 1032 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 PCNAP12004 261 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 ICAM2P13598 275 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 EEF1DP29692 281 aaKnown RBP10.85□□□□□ -0.67
SLIRP-205ENST00000556310 CD97P48960 835 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 PLA2G16P53816 162 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 NSDHLQ15738 373 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 CRB2Q5IJ48 1285 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 LIPJQ5W064 366 aa10.85□□□□□ -0.67
SLIRP-205ENST00000556310 PLAG1Q6DJT9 500 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms