RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TMEM135Q86UB9 458 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 AMIGO1Q86WK6 493 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 TBC1D21Q8IYX1 336 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 FITM2Q8N6M3 262 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 CEP112Q8N8E3 955 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 OR52E1Q8NGJ3 308 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 MAGEC3Q8TD91 643 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 EEF1AKMT1Q8WVE0 214 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 KCNE4Q8WWG9 221 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 SLCO2A1Q92959 643 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 PEX13Q92968 403 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 GRAMD1AQ96CP6 724 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 MVB12AQ96EY5 273 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 CERS2Q96G23 380 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 LINC00615Q96LM1 132 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-238ENST00000556288 LRGUKQ96M69 825 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 PPM1MQ96MI6 270 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 ZNF578Q96N58 590 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-238ENST00000556288 IL17FQ96PD4 163 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 GPR21Q99679 349 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 TUBB2BQ9BVA1 445 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 OR52A5Q9H2C5 316 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 ZNF768Q9H5H4 540 aaKnown RBP4.48□□□□□ -1.69
ATXN3-238ENST00000556288 KIR3DX1Q9H7L2 352 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 APMAPQ9HDC9 416 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 RRAGDQ9NQL2 400 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-238ENST00000556288 FAM114A2Q9NRY5 505 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 INTS10Q9NVR2 710 aaKnown RBP4.48□□□□□ -1.69
ATXN3-238ENST00000556288 OGFRQ9NZT2 677 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 SLC17A6Q9P2U8 582 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 MTRF1LQ9UGC7 380 aaKnown RBP4.48□□□□□ -1.69
ATXN3-238ENST00000556288 POLHQ9Y253 713 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 CHST2Q9Y4C5 530 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 NFS1Q9Y697 457 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 TEX264Q9Y6I9 313 aa4.48□□□□□ -1.69
ATXN3-238ENST00000556288 IGHV5-51A0A0C4DH38 117 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 A0A1W2PNU3 283 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 KRT87PA6NCN2 255 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 OR5K3A6NET4 321 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 LILRA5A6NI73 299 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 POC1B-GALNT4F8VUJ3 575 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 BTN3A3O00478 584 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 BTN3A1O00481 513 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RNASET2O00584 256 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SLC16A6O15403 523 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TLX3O43711 291 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RFPL1O75677 317 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 NCR1O76036 304 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 PRSS23O95084 383 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 GUCA1CO95843 209 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CATP04040 527 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 EIF2S1P05198 315 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CD1AP06126 327 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CHRM5P08912 532 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 HIST1H2AGP0C0S8 130 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SBK3P0C264 359 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 EBLN1P0CF75 366 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 HIST1H2ADP20671 130 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RPS3P23396 243 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 PSMA3P25788 255 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ACADLP28330 430 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 PRDX3P30048 256 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CCKBRP32239 447 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SHMT2P34897 504 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RPA3P35244 121 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 GRIA3P42263 894 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SKIV2L2P42285 1042 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RGS4P49798 205 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 KPNA2P52292 529 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CXADRP78310 365 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 HSD11B2P80365 405 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 MC2RQ01718 297 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 EIF3IQ13347 325 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ZNF267Q14586 743 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 NR1D2Q14995 579 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 KYNUQ16719 465 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CLPPQ16740 277 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 COL28A1Q2UY09 1125 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TBC1D25Q3MII6 688 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CCSMST1Q4G0I0 132 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TIGD2Q4W5G0 525 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 MANEAQ5SRI9 462 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TEX35Q5T0J7 233 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RBM20Q5T481 1227 aaKnown RBP4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TEDDM1Q5T9Z0 273 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ARHGAP40Q5TG30 622 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 HECTD2Q5U5R9 776 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ZNF549Q6P9A3 640 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CRIP3Q6Q6R5 217 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 SUSD1Q6UWL2 747 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 RAPH1Q70E73 1250 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ARHGAP22Q7Z5H3 698 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 ADCK2Q7Z695 626 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TRIM73Q86UV7 250 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 VASH2Q86V25 355 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 TMEM126BQ8IUX1 230 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 IFT20Q8IY31 132 aa4.47□□□□□ -1.69
ATXN3-238ENST00000556288 CPNE9Q8IYJ1 553 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms