RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 TGFBR1P36897 503 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CSNK1DP48730 415 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ZNF763Q0D2J5 394 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 NPRL3Q12980 569 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 SNAPC1Q16533 368 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 PLEKHG7Q6ZR37 379 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ZSWIM3Q96MP5 696 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ALPK1Q96QP1 1244 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 NTMT1Q9BV86 223 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 AMBRA1Q9C0C7 1298 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 SNTG1Q9NSN8 517 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 IL37Q9NZH6 218 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ZNF282Q9UDV7 671 aaPredicted RBP14.26□□□□□ -0.13
CUX1-215ENST00000556210 ATP6V1HQ9UI12 483 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 FADS2P1A8MWK0 482 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 GRXCR1A8MXD5 290 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 AQP9O43315 295 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CCNB2O95067 398 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 SNX4O95219 450 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 C9P02748 559 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 C6P13671 934 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 TIMP2P16035 220 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 PHC1P78364 1004 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CTBSQ01459 385 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CREMQ03060 361 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 SPATS1Q496A3 300 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 PLEKHS1Q5SXH7 462 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 DCST1Q5T197 706 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 WDR53Q7Z5U6 358 aaPredicted RBP14.26□□□□□ -0.13
CUX1-215ENST00000556210 OR9A1PQ8NGU1 263 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ZNF480Q8WV37 535 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 NEURL2Q9BR09 285 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 OSBPL10Q9BXB5 764 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 GPN2Q9H9Y4 310 aaPredicted RBP14.26□□□□□ -0.13
CUX1-215ENST00000556210 SPATA7Q9P0W8 599 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ENPP5Q9UJA9 477 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 CACNA1IQ9P0X4 2223 aa14.26□□□□□ -0.13
CUX1-215ENST00000556210 ZNF860A6NHJ4 632 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 GNB5O14775 395 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 HBA1P69905 142 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ELP6Q0PNE2 266 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 KCNJ8Q15842 424 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 DPY19L1Q2PZI1 675 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 KLHL12Q53G59 568 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ASTLQ6HA08 431 aaPredicted RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 PARS2Q7L3T8 475 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 CCDC116Q8IYX3 515 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 BADQ92934 168 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 UBE2E3Q969T4 207 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 DUS3LQ96G46 650 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 TMEM245Q9H330 911 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 PAK1IP1Q9NWT1 392 aaPredicted RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 PCDHB11Q9Y5F2 797 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ARNTLO00327 626 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ACOX3O15254 700 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 IRS1P35568 1242 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 UGT2B15P54855 530 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ST3GAL4Q11206 333 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 NDUFA5Q16718 116 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ZNF852Q6ZMS4 543 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 BTLAQ7Z6A9 289 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 C10orf111Q8N326 155 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 TEX12Q9BXU0 123 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 TM9SF3Q9HD45 589 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 TM7SF3Q9NS93 570 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 FAM120CQ9NX05 1096 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 FBXO10Q9UK96 956 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 WBP11Q9Y2W2 641 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 MGAMO43451 1857 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 TMEM221A6NGB7 291 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 SAGE2PA6NJ88 616 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 UGT2B17O75795 530 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 DNTTP04053 509 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ACADMP11310 421 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 MYOGP15173 224 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 PPIBP23284 216 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 NOS3P29474 1203 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 TIA1P31483 386 aaKnown RBP eCLIP14.25□□□□□ -0.132e-8■■■■■ 40
CUX1-215ENST00000556210 GSTM5P46439 218 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 NRIP1P48552 1158 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 DSTNP60981 165 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ADARB1P78563 741 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 EMX1Q04741 257 aaPredicted RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 UGT8Q16880 541 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 LEXMQ3ZCV2 418 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ZNF404Q494X3 552 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 HTR3DQ70Z44 454 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 CPA6Q8N4T0 437 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 DPP10Q8N608 796 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 FAM129BQ96TA1 746 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 POLR2J3Q9H1A7 115 aaKnown RBP14.25□□□□□ -0.13
CUX1-215ENST00000556210 KLHL1Q9NR64 748 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 MS4A12Q9NXJ0 267 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 TAS2R16Q9NYV7 291 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 DPP7Q9UHL4 492 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ZNF221Q9UK13 617 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 ALPK2Q86TB3 2170 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 OR52A4PA6NMU1 304 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 FRS3O43559 492 aa14.25□□□□□ -0.13
CUX1-215ENST00000556210 SEC14L2O76054 403 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms