RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZNF24P17028 368 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 IDSP22304 550 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 MAPK9P45984 424 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 UGT2B15P54855 530 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 SLC14A1Q13336 389 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 SPANXN2Q5MJ10 180 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 GALNT13Q8IUC8 556 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 SNX29P2Q8IUI4 249 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 CXorf40BQ96DE9 158 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 BARD1Q99728 777 aaKnown RBP14.24□□□□□ -0.13
NEK9-209ENST00000556170 DOHHQ9BU89 302 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 IL23AQ9NPF7 189 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 TBX21Q9UL17 535 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 BTBD3Q9Y2F9 522 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 APOL3O95236 402 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 CYP17A1P05093 508 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 FSHRP23945 695 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 DDX6P26196 483 aaKnown RBP eCLIP14.24□□□□□ -0.13
NEK9-209ENST00000556170 C1DQ13901 141 aaKnown RBP14.24□□□□□ -0.13
NEK9-209ENST00000556170 TIGD6Q17RP2 521 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 EXOC3L2Q2M3D2 409 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.24□□□□□ -0.13
NEK9-209ENST00000556170 ANKRD33Q7Z3H0 272 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 ADIPOR2Q86V24 386 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 KAT2AQ92830 837 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 AMBRA1Q9C0C7 1298 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 KLHL28Q9NXS3 571 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 ERGIC3Q9Y282 383 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 TRIM64CA6NLI5 447 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 UGT2B17O75795 530 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 CLPXO76031 633 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 LASP1Q14847 261 aaKnown RBP14.24□□□□□ -0.13
NEK9-209ENST00000556170 RPS26P11Q5JNZ5 115 aaPredicted RBP14.24□□□□□ -0.13
NEK9-209ENST00000556170 TMEM179BQ7Z7N9 219 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 ARMC8Q8IUR7 673 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 MIR1-1HGQ9H1L0 117 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 IL1RAPQ9NPH3 570 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 APODP05090 189 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 CCR8P51685 355 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 NCBP2P52298 156 aaKnown RBP eCLIP14.24□□□□□ -0.131e-10■■■□□ 14.8
NEK9-209ENST00000556170 KCNC3Q14003 757 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 GRHL2Q6ISB3 625 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 NTN4Q9HB63 628 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 FBXL12Q9NXK8 326 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 SLC9A8Q9Y2E8 581 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 CARD8Q9Y2G2 431 aa14.24□□□□□ -0.13
NEK9-209ENST00000556170 MIA3Q5JRA6 1907 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 MFN2O95140 757 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ETHE1O95571 254 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 HOXD12P35452 270 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ANXA11P50995 505 aaKnown RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 ZNF234Q14588 700 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ZNF846Q147U1 533 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 CPZQ66K79 652 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 NXPE4Q6UWF7 544 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 TRIM43Q96BQ3 446 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 KXD1Q9BQD3 176 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 TM7SF3Q9NS93 570 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 EHD3Q9NZN3 535 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 CACNB4O00305 520 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 MID1O15344 667 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 TBX1O43435 398 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 MED26O95402 600 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ALDH3B2P48448 385 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 RNF144AP50876 292 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 BMXP51813 675 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ZNF420Q8TAQ5 688 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 C16orf78Q8WTQ4 265 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ZNF689Q96CS4 500 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 OMA1Q96E52 524 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ALPK1Q96QP1 1244 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 POLR2J3Q9H1A7 115 aaKnown RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 KCNK12Q9HB15 430 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 TRBV5-4A0A0C4DH59 114 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 SMIM30A4D0T7 59 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 EFCAB10A6NFE3 127 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 OR52A4PA6NMU1 304 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 PRMT3O60678 531 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 BCAS1O75363 584 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 KCNK5O95279 499 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 CA3P07451 260 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ANXA8P13928 327 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 AZGP1P25311 298 aaKnown RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 LRRC32Q14392 662 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 SLC5A12Q1EHB4 618 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 ZNF829Q3KNS6 432 aaPredicted RBP14.23□□□□□ -0.13
NEK9-209ENST00000556170 TJAP1Q5JTD0 557 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 DCUN1D3Q8IWE4 304 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 NLGN4XQ8N0W4 816 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 OXR1Q8N573 874 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 SLC15A4Q8N697 577 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 OR4E2Q8NGC2 313 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 LCN9Q8WX39 176 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 TMEM203Q969S6 136 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 NXPE3Q969Y0 559 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 RDH12Q96NR8 316 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 POLE4Q9NR33 117 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 FBXO10Q9UK96 956 aa14.23□□□□□ -0.13
NEK9-209ENST00000556170 PIKFYVEQ9Y2I7 2098 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms