RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 NPLQ9BXD5 320 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ACTR5Q9H9F9 607 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 CLK4Q9HAZ1 481 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 KCNK13Q9HB14 408 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 CUTCQ9NTM9 273 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 GIMAP4Q9NUV9 329 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM45AQ9NWC5 275 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 SLC39A1Q9NY26 324 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 G3BP2Q9UN86 482 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 LOXL2Q9Y4K0 774 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ZNF292O60281 2723 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 CROCCQ5TZA2 2017 aa10.65□□□□□ -0.71
SHMT2-220ENST00000555634 FAM186AA6NE01 2351 aa10.65□□□□□ -0.71
SHMT2-220ENST00000555634 PTPRBP23467 1997 aa10.65□□□□□ -0.71
SHMT2-220ENST00000555634 WDR87Q6ZQQ6 2873 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 EP300Q09472 2414 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 DYTNA2CJ06 578 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 BLACEA4D250 179 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 FITM1A5D6W6 292 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 SYNDIG1LA6NDD5 238 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 EBAG9O00559 213 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 FCHO1O14526 889 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 PRAMEF10O60809 474 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 SLC22A3O75751 556 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 KIAA0754O94854 1291 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 KLHL18O94889 574 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 NR2F6P10588 404 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 FOLR1P15328 257 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 AGXTP21549 392 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 FBLP22087 321 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 JAK1P23458 1154 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 PPP2R1BP30154 601 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 PRTGQ2VWP7 1150 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 RFTN2Q52LD8 501 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 PDCD4Q53EL6 469 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 CDCP2Q5VXM1 449 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 GALNT18Q6P9A2 607 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 ABHD17CQ6PCB6 329 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 Q6ZSR9 355 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 TMPRSS9Q7Z410 1059 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 B3GNT8Q7Z7M8 397 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 MTDHQ86UE4 582 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 C7orf57Q8NEG2 295 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 WDR36Q8NI36 951 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 UTP15Q8TED0 518 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 CHTF18Q8WVB6 975 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF501Q96CX3 271 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 ERP27Q96DN0 273 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 CMTM5Q96DZ9 223 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 MARK4Q96L34 752 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 DPH2Q9BQC3 489 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 BRINP2Q9C0B6 783 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 DDX31Q9H8H2 851 aaKnown RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 MYNNQ9NPC7 610 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 FBXO8Q9NRD0 319 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 SIRT5Q9NXA8 310 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 ZIM2Q9NZV7 527 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 NAALAD2Q9Y3Q0 740 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 CCL27Q9Y4X3 112 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 USP34Q70CQ2 3546 aa10.64□□□□□ -0.71
SHMT2-220ENST00000555634 ZFHX2Q9C0A1 2572 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-220ENST00000555634 A0A0G2JN53 185 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 C9J4A7 227 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 H0YIG0 161 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 PLD2O14939 933 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 DSCR3O14972 297 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ANGPT2O15123 496 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 RRP9O43818 475 aaKnown RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 GALR3O60755 368 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SCELO95171 688 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 NSA2O95478 260 aaKnown RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ETHE1O95571 254 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 KLK3P07288 261 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 FAM58BPP0C7Q3 252 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 FGF5P12034 268 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 BCKDHAP12694 445 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 RNH1P13489 461 aaKnown RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 COX7A2P14406 83 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 IL1RNP18510 177 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SDC1P18827 310 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ALAS2P22557 587 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ATP5A1P25705 553 aaKnown RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 CERS1P27544 350 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ALDH9A1P49189 494 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 MNAT1P51948 309 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 MAPK10P53779 464 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 MC2RQ01718 297 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 LRRC74AQ0VAA2 488 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SLAMF1Q13291 335 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 C16orf72Q14CZ0 275 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 TERF2Q15554 542 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 MMEL1Q495T6 779 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 C6orf163Q5TEZ5 329 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 ARHGAP40Q5TG30 622 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 FOXR1Q6PIV2 292 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 TTLL10Q6ZVT0 673 aa10.63□□□□□ -0.71
SHMT2-220ENST00000555634 SAMD14Q8IZD0 417 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-220ENST00000555634 CACTIN-AS1Q8N1I8 211 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms