RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NUDT9Q9BW91 350 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 LHPPQ9H008 270 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 NOL11Q9H8H0 719 aaKnown RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 DCDC2Q9UHG0 476 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 MRPS33Q9Y291 106 aaKnown RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 SPACA6W5XKT8 324 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 PCSK5Q92824 1860 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 IGHV1-45A0A0A0MS14 117 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 TLDC2A0PJX2 215 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 E2F3O00716 465 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 PRMT3O60678 531 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 PRAMEF4O60810 478 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 GLRA3O75311 464 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 COX6A1P12074 109 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 ICAM2P13598 275 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 PIK3CBP42338 1070 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 SSR2P43308 183 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 CCT5P48643 541 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 MTTPP55157 894 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 ACTN3Q08043 901 aaPredicted RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 PCDH1Q08174 1060 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 CPSF6Q16630 551 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRP54-206ENST00000555317 ERCC6LQ2NKX8 1250 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 AP5B1Q2VPB7 878 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 PRAMEF9Q5VWM5 478 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 ADNP2Q6IQ32 1131 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 TMEM205Q6UW68 189 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 CPEB2Q7Z5Q1 589 aaKnown RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 TDRPQ86YL5 185 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 SLC22A9Q8IVM8 553 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 LAS2Q8IYD9 372 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 CCDC63Q8NA47 563 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 OR7G3Q8NG95 312 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 HUS1BQ8NHY5 278 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 MAGEB10Q96LZ2 347 aaPredicted RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 F2RL3Q96RI0 385 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 SERINC2Q96SA4 455 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 SMAD5Q99717 465 aaKnown RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 TUBB6Q9BUF5 446 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 NPLQ9BXD5 320 aaPredicted RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 IQCGQ9H095 443 aaKnown RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 ZNF700Q9H0M5 742 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 SEMA4BQ9NPR2 832 aaPredicted RBP11.41□□□□□ -0.58
SRP54-206ENST00000555317 C5AR2Q9P296 337 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 PCTPQ9UKL6 214 aa11.41□□□□□ -0.58
SRP54-206ENST00000555317 LOC102723996A0A087X1L8 192 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 A8MT66 165 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 MAGEB17A8MXT2 336 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 H0YIV9 168 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 K7EM74 188 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 MASP2O00187 686 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 CLDN4O14493 209 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 COPEO14579 308 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 SH3BGRLO75368 114 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 SEC24DO94855 1032 aaPredicted RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 OTCP00480 354 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 TGFB1P01137 390 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 TUBBP07437 444 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 SMIM10L1P0DMW3 83 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 ATP5F1P24539 256 aaPredicted RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 CERS1P27544 350 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 SOX8P57073 446 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 OR4D2P58180 307 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 HERVK_113P63132 956 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 IFT88Q13099 833 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 E2F2Q14209 437 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 ADPRMQ3LIE5 342 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 KHDRBS2Q5VWX1 349 aaKnown RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 RIPOR1Q6ZS17 1223 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 LANCL3Q6ZV70 420 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 VN1R5Q7Z5H4 357 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 ANKRD37Q7Z713 158 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 CYP4X1Q8N118 509 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 CA13Q8N1Q1 262 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 RIBC1Q8N443 379 aaPredicted RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 ZADH2Q8N4Q0 377 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 AENQ8WTP8 325 aaKnown RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 ZNF473Q8WTR7 871 aaKnown RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 CAVIN3Q969G5 261 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 RGMAQ96B86 450 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 SMIM10Q96HG1 83 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 PTCHD1Q96NR3 888 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 MTERF1Q99551 399 aaKnown RBP11.4□□□□□ -0.58
SRP54-206ENST00000555317 TBCDQ9BTW9 1192 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 ERVK-6Q9BXR3 956 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 MS4A8Q9BY19 250 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 ELOVL6Q9H5J4 265 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 MLXIPLQ9NP71 852 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 DMRT3Q9NQL9 472 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 LANCL2Q9NS86 450 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 TMEM216Q9P0N5 145 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 STK38LQ9Y2H1 464 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 RNF11Q9Y3C5 154 aa11.4□□□□□ -0.58
SRP54-206ENST00000555317 A0A1W2PPM1 405 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 A0A1W2PQ72 361 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 OR2W5A6NFC9 320 aa11.39□□□□□ -0.59
SRP54-206ENST00000555317 C4orf51C9J302 202 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms