RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PDCD1Q15116 288 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 NEDD8Q15843 81 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 BCL2A1Q16548 175 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PPP1R3AQ16821 1122 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 VPS26BQ4G0F5 336 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ATP6AP1LQ52LC2 224 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 USP39Q53GS9 565 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FGD3Q5JSP0 725 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 C6orf141Q5SZD1 244 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ATAD3BQ5T9A4 648 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FAM72AQ5TYM5 149 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ATG9BQ674R7 924 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PMS2CLQ68D20 193 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GLYATQ6IB77 296 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FAM72DQ6L9T8 149 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 NANOGP8Q6NSW7 305 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FAM171BQ6P995 826 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 LAYNQ6UX15 382 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM26Q6ZUK4 368 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GAREM2Q75VX8 874 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SYT13Q7L8C5 426 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 DNAJB7Q7Z6W7 309 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TAC4Q86UU9 113 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FAM72BQ86X60 149 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 LGI2Q8N0V4 545 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ZCCHC7Q8N3Z6 543 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TMCO5AQ8N6Q1 288 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ATP6V0D2Q8N8Y2 350 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 OR7A2PQ8NGA2 310 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 OR13J1Q8NGT2 312 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 OR5K1Q8NHB7 308 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 BRSK1Q8TDC3 778 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SNRNP27Q8WVK2 155 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 CFHR4Q92496 578 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ISG20Q96AZ6 181 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TAMM41Q96BW9 452 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 BIRC7Q96CA5 298 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PHF21BQ96EK2 531 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PCED1BQ96HM7 432 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SENP8Q96LD8 212 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GNRHR2Q96P88 292 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 LRRC3BQ96PB8 259 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 NODALQ96S42 347 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ATOH8Q96SQ7 321 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SMOQ99835 787 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 APOL4Q9BPW4 351 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SOX7Q9BT81 388 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 ZYG11BQ9C0D3 744 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SLC39A8Q9C0K1 460 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PITHD1Q9GZP4 211 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 POLR1EQ9GZS1 481 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 GABARAPL1Q9H0R8 117 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FBXO44Q9H4M3 255 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 NANOGQ9H9S0 305 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FANCEQ9HB96 536 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SLC52A3Q9NQ40 469 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM248Q9NWD8 314 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PAK1IP1Q9NWT1 392 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 SMPD4Q9NXE4 827 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 KCMF1Q9P0J7 381 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 EVLQ9UI08 416 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 DAPK2Q9UIK4 370 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 BAG5Q9UL15 447 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 NEU3Q9UQ49 428 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 EIF3LQ9Y262 564 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FIS1Q9Y3D6 152 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 FAM32AQ9Y421 112 aaKnown RBP5.71□□□□□ -1.5
VPS33B-203ENST00000554264 PRKAB1Q9Y478 270 aa5.71□□□□□ -1.5
VPS33B-203ENST00000554264 NUP205Q92621 2012 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 A0A0A6YYJ9 748 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 C1orf232A0A0U1RR37 186 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PNMA8CA0A1B0GUJ8 204 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PRSS38A1L453 326 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 MTMR11A4FU01 709 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 HTR3EA5X5Y0 456 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM247A6NEH6 219 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 NEMP2A6NFY4 417 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CLDN24A6NM45 220 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 FAM220BPB1ANY3 271 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SUPT3HB4E1H0 165 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 E9PAM4 449 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 SLC28A1O00337 649 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PLOD2O00469 737 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 UBFD1O14562 309 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 GNGT2O14610 69 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 CDX4O14627 284 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 RGS14O43566 566 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 KDM1AO60341 852 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 NDUFS2O75306 463 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 ERN1O75460 977 aaKnown RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 PRAMEF12O95522 483 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 NDST3O95803 873 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 MT-CYBP00156 380 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-203ENST00000554264 OTCP00480 354 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 EGFP01133 1207 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 GNAO1P09471 354 aa5.7□□□□□ -1.5
VPS33B-203ENST00000554264 OR4Q2P0C623 313 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms