RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ZNF517Q6ZMY9 492 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 ZNF793Q6ZN11 406 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 Q6ZSR9 355 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 FAM47EQ6ZV65 393 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 DTX1Q86Y01 620 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 METTL4Q8N3J2 472 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 AMER3Q8N944 861 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 OR2T11Q8NH01 316 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 PIWIL2Q8TC59 973 aaKnown RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 GATA6Q92908 595 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 QRFPRQ96P65 431 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 SERINC2Q96SA4 455 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 ZNF717Q9BY31 904 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 MRPL1Q9BYD6 325 aaKnown RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 ROGDIQ9GZN7 287 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 CHST8Q9H2A9 424 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 AKIRIN1Q9H9L7 192 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 COPS7BQ9H9Q2 264 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-209ENST00000553949 ZNF304Q9HCX3 659 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 PFDN4Q9NQP4 134 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 SLC22A11Q9NSA0 550 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 VTI1BQ9UEU0 232 aa11.6□□□□□ -0.55
SHMT2-209ENST00000553949 NPIPB8E9PQR5 432 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 HDAC3O15379 428 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 B3GALT2O43825 422 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 EDF1O60869 148 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 DNAJB6O75190 326 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 EEDO75530 441 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 SCELO95171 688 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 LIPCP11150 499 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 PIM1P11309 404 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 PRPH2P23942 346 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 CERS1P27544 350 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 BSGP35613 385 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 SSR2P43308 183 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 HK2P52789 917 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 GYS2P54840 703 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 OLR1P78380 273 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 MAT1AQ00266 395 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 SLC9A5Q14940 896 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 FAM199XQ6PEV8 388 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 COX15Q7KZN9 410 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 COMMD6Q7Z4G1 85 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 NUDT13Q86X67 352 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 WDR75Q8IWA0 830 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 CACNA2D3Q8IZS8 1091 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 C1orf52Q8N6N3 182 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 ACOT4Q8N9L9 421 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 OR5T3Q8NGG3 340 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 CHTF18Q8WVB6 975 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 FGF11Q92914 225 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 NKD1Q969G9 470 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 APIPQ96GX9 242 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 PPP1R36Q96LQ0 422 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 C3orf30Q96M34 536 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 NPLQ9BXD5 320 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 DDX31Q9H8H2 851 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 CLK4Q9HAZ1 481 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 HCN3Q9P1Z3 774 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 IFT80Q9P2H3 777 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
SHMT2-209ENST00000553949 MDC1Q14676 2089 aaKnown RBP11.59□□□□□ -0.55
SHMT2-209ENST00000553949 A0A0A6YYD5 115 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 ATP6AP2A0A1C7CYW4 349 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 TRPC5OSA6NMA1 111 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 C9J4A7 227 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 LSM1O15116 133 aaKnown RBP11.58□□□□□ -0.56
SHMT2-209ENST00000553949 POLR3GO15318 223 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-209ENST00000553949 CHST10O43529 356 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 ATP6AP2O75787 350 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 KLK1P06870 262 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 STAT5AP42229 794 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 PCBP4P57723 403 aaKnown RBP11.58□□□□□ -0.56
SHMT2-209ENST00000553949 ACSM2AQ08AH3 577 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 SLAMF1Q13291 335 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 RUNX2Q13950 521 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 NR6A1Q15406 480 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 TGIF1Q15583 401 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 SYT16Q17RD7 645 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 SPIN4Q56A73 249 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 ACSM2BQ68CK6 577 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 CYP20A1Q6UW02 462 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 FAM198BQ6UWH4 519 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 OVCH1Q7RTY7 1134 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 PAGE2Q7Z2X7 111 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 MAVSQ7Z434 540 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 CA13Q8N1Q1 262 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 ZCCHC7Q8N3Z6 543 aaKnown RBP11.58□□□□□ -0.56
SHMT2-209ENST00000553949 OR51Q1Q8NH59 317 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 CT55Q8WUE5 264 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 METTL2AQ96IZ6 378 aaKnown RBP11.58□□□□□ -0.56
SHMT2-209ENST00000553949 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
SHMT2-209ENST00000553949 CCDC86Q9H6F5 360 aaKnown RBP11.58□□□□□ -0.56
SHMT2-209ENST00000553949 MEAF6Q9HAF1 191 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms