RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CAPN13Q6MZZ7 669 aaPredicted RBP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 MFSD9Q8NBP5 474 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 LRRN4CLQ8ND94 238 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ABHD11Q8NFV4 315 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 TNIP2Q8NFZ5 429 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 OR4K1Q8NGD4 311 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 SLC13A3Q8WWT9 602 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 IGFBPL1Q8WX77 278 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 CCDC42Q96M95 316 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 PTCHD1Q96NR3 888 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 RASL10BQ96S79 203 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 SGPP1Q9BX95 441 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF703Q9H7S9 590 aaPredicted RBP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 IL1RL2Q9HB29 575 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ETNK1Q9HBU6 452 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 PRDM9Q9NQV7 894 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 YARS2Q9Y2Z4 477 aaKnown RBP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 DUSP10Q9Y6W6 482 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ABCA1O95477 2261 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 FREM3P0C091 2139 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 LRRC3CA6NJW4 275 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 HSPB2A8KAH6 182 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 G3V3Y1 287 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 SIAH2O43255 324 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 HCN1O60741 890 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 NDUFS3O75489 264 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 MYO1DO94832 1006 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 TJP3O95049 919 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 SMIM10L1P0DMW3 83 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 GABRA1P14867 456 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 ALOX12P18054 663 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 BMP5P22003 454 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 NMBRP28336 390 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 TIMP3P35625 211 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 WNT3P56703 355 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 CRADDP78560 199 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 PWP1Q13610 501 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 CAPRIN1Q14444 709 aaKnown RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 OASLQ15646 514 aaKnown RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 HSPB2Q16082 182 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 ACSF3Q4G176 576 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 GK5Q6ZS86 529 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 CAPN12Q6ZSI9 719 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 STRA8Q7Z7C7 330 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 VWA5B2Q8N398 1253 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 TMEM156Q8N614 296 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 LRRC57Q8N9N7 239 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 PPP1R14CQ8TAE6 165 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 LINC01560Q8TB33 94 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 NT5CQ8TCD5 201 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 UTP15Q8TED0 518 aaKnown RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 SMPDL3BQ92485 455 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 NCLNQ969V3 563 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 VMP1Q96GC9 406 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 SMIM10Q96HG1 83 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 SCYL1Q96KG9 808 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 Q96MF0 132 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 PANX2Q96RD6 677 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 FAM173AQ9BQD7 235 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 CCDC177Q9NQR7 707 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 MYOTQ9UBF9 498 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF629Q9UEG4 869 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 DRG1Q9Y295 367 aaKnown RBP8.38□□□□□ -1.07
PRKCH-208ENST00000553846 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 NPFFR2Q9Y5X5 522 aa8.38□□□□□ -1.07
PRKCH-208ENST00000553846 TUBAL3A6NHL2 446 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 A8MUA0 341 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 A8MVJ9 347 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 H3BMM5 538 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 NDUFS4O43181 175 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 CEP104O60308 925 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 RFPL3SP0C7P2 107 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 SLC35G6P0C7Q6 338 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF888P0CJ79 500 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-208ENST00000553846 CCL3P10147 92 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 CDH1P12830 882 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 CNR1P21554 472 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 FMO4P31512 558 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 DNASE1L1P49184 302 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 MAN2A2P49641 1150 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 HNRNPFP52597 415 aaKnown RBP8.37□□□□□ -1.07
PRKCH-208ENST00000553846 HK2P52789 917 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 PLGLB1Q02325 96 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 TRIM14Q14142 442 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 PCID2Q5JVF3 399 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 WLSQ5T9L3 541 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF549Q6P9A3 640 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 CENPUQ71F23 418 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 FBXW8Q8N3Y1 598 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 PRELID2Q8N945 189 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 GOLM1Q8NBJ4 401 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 TMEM52Q8NDY8 209 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 SARAFQ96BY9 339 aa8.37□□□□□ -1.07
PRKCH-208ENST00000553846 PDLIM2Q96JY6 352 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms