RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 EXO1Q9UQ84 846 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 POFUT2Q9Y2G5 429 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 MRPS23Q9Y3D9 190 aaKnown RBP12.38□□□□□ -0.43
SHMT2-205ENST00000553474 PCDHGA10Q9Y5H3 936 aa12.38□□□□□ -0.43
SHMT2-205ENST00000553474 ARRDC5A6NEK1 342 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 XPNPEP2O43895 674 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 C6P13671 934 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 CEBPBP17676 345 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 PBLDP30039 288 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 RRM2P31350 389 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 PRIM2P49643 509 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 RPP38P78345 283 aaKnown RBP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 TMED1Q13445 227 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 CATSPEREQ5SY80 951 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 DCUN1D3Q8IWE4 304 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 PARP8Q8N3A8 854 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 GEMIN6Q8WXD5 167 aaKnown RBP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 SIGLEC11Q96RL6 698 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 BARD1Q99728 777 aaKnown RBP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 ANKHQ9HCJ1 492 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 HMG20AQ9NP66 347 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 C1GALT1Q9NS00 363 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 NDUFAF4Q9P032 175 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 DEC1Q9P2X7 70 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 ITM2BQ9Y287 266 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 LYVE1Q9Y5Y7 322 aa12.37□□□□□ -0.43
SHMT2-205ENST00000553474 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
SHMT2-205ENST00000553474 CLDN24A6NM45 220 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 GPR89AB7ZAQ6 455 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-205ENST00000553474 POP7O75817 140 aaKnown RBP12.36□□□□□ -0.43
SHMT2-205ENST00000553474 INMTO95050 263 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 GPR89BP0CG08 455 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 ERGP11308 486 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 POU3F3P20264 500 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-205ENST00000553474 HMGA2P52926 109 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 IL1RL1Q01638 556 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 DLX2Q07687 328 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-205ENST00000553474 C2orf80Q0P641 193 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 SCARB2Q14108 478 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 STARD3Q14849 445 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 FNDC3BQ53EP0 1204 aaKnown RBP12.36□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF385BQ569K4 471 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 PRAMEF14Q5SWL7 426 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 PRAMEF13Q5VWM6 474 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 C16orf87Q6PH81 154 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 XKR5Q6UX68 686 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 PDZD3Q86UT5 571 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 P2RY8Q86VZ1 359 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 ARMC8Q8IUR7 673 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 DEPDC4Q8N2C3 294 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 SMG7Q92540 1137 aaKnown RBP12.36□□□□□ -0.43
SHMT2-205ENST00000553474 SGCDQ92629 289 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 YIPF6Q96EC8 236 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 HSPBAP1Q96EW2 488 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 RHBGQ9H310 441 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 MTG2Q9H4K7 406 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 ANGPT4Q9Y264 503 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF451Q9Y4E5 1061 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 EYSQ5T1H1 3165 aa12.36□□□□□ -0.43
SHMT2-205ENST00000553474 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 C1QTNF3-AMACRE9PGA6 284 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 FAM20BO75063 409 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 GCM2O75603 506 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 C6orf47O95873 294 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 NTRK1P04629 796 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 NUDT7P0C024 238 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 UQCRC2P22695 453 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 FMO3P31513 532 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 GGT2P36268 569 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CDK6Q00534 326 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ADAM15Q13444 863 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF846Q147U1 533 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 CLCA4Q14CN2 919 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 DGUOKQ16854 277 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ADNP2Q6IQ32 1131 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ANKRD54Q6NXT1 300 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ADAMTSL4Q6UY14 1074 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 FAM92BQ6ZTR7 304 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 FAM124AQ86V42 546 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 FAM129CQ86XR2 697 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF547Q8IVP9 402 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHMT2-205ENST00000553474 DENND6BQ8NEG7 585 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ABHD11Q8NFV4 315 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 SPPL2AQ8TCT8 520 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 FOXJ1Q92949 421 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ARRDC3Q96B67 414 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 QRFPRQ96P65 431 aa12.35□□□□□ -0.43
SHMT2-205ENST00000553474 ZNF300Q96RE9 604 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms