RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 FOXN2P32314 431 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 TRHRP34981 398 aaPredicted RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 RPA3P35244 121 aaPredicted RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 PEX19P40855 299 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CDKN2BP42772 138 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PPIAP62937 165 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 RHAGQ02094 409 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PLGLB1Q02325 96 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PTK6Q13882 451 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PRPSAP1Q14558 356 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 NAA25Q14CX7 972 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 DAZAP2Q15038 168 aaPredicted RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 POU4F3Q15319 338 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 TMED2Q15363 201 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 NSDHLQ15738 373 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 NDUFA9Q16795 377 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ANKRD20A2Q5SQ80 823 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ANKRD20A1Q5TYW2 823 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 LRRC38Q5VT99 294 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ANKRD20A3Q5VUR7 823 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 SUSD1Q6UWL2 747 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 MDGA2Q7Z553 956 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ADCK2Q7Z695 626 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CXorf67Q86X51 503 aaPredicted RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 CILP2Q8IUL8 1156 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CYP4Z2PQ8N1L4 340 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PLD6Q8N2A8 252 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 RAB42Q8N4Z0 105 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 SIMC1Q8NDZ2 872 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PLPP5Q8NEB5 264 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 GSDMBQ8TAX9 411 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 HMGCLL1Q8TB92 370 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ZCCHC10Q8TBK6 192 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ELP5Q8TE02 316 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CREB3L4Q8TEY5 395 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 STYXQ8WUJ0 223 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ASZ1Q8WWH4 475 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ALS2CR12Q96Q35 445 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 OR2A5Q96R48 311 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 MACROD1Q9BQ69 325 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 SARGQ9BW04 601 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ACSS3Q9H6R3 686 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ANO10Q9NW15 660 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ALKBH4Q9NXW9 302 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 DDX56Q9NY93 547 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 FEZ2Q9UHY8 353 aaPredicted RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 LCMT1Q9UIC8 334 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 ACAD8Q9UKU7 415 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 NENFQ9UMX5 172 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 R3HDM2Q9Y2K5 976 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 AAR2Q9Y312 384 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 LIPGQ9Y5X9 500 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 BZW2Q9Y6E2 419 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 DUSP10Q9Y6W6 482 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CR1P17927 2039 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 WNK1Q9H4A3 2382 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 MEGF8Q7Z7M0 2845 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 hCG_1818297A0A087WSY0 165 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 A0A1W2PPR1 153 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 MACROD2A1Z1Q3 448 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 TRIM64A6NGJ6 449 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 ZNF860A6NHJ4 632 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 TRIM64BA6NI03 449 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 CLCA1A8K7I4 914 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 MAGEB17A8MXT2 336 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 H0YIG0 161 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 SPOPO43791 374 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 RDH16O75452 317 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 CRLF1O75462 422 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 PKMP14618 531 aaKnown RBP4.99□□□□□ -1.61
HOXB3-213ENST00000552000 AOAHP28039 575 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 BCL6P41182 706 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 ASCL1P50553 236 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 STX1AQ16623 288 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 TYSND1Q2T9J0 566 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 FILIP1LQ4L180 1135 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 CCDC38Q502W7 563 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 C1orf185Q5T7R7 199 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 RIPPLY2Q5TAB7 128 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 ICE2Q659A1 982 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 ZNF425Q6IV72 752 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 TRILQ7L0X0 811 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 LDB1Q86U70 411 aaPredicted RBP4.99□□□□□ -1.61
HOXB3-213ENST00000552000 C1QL4Q86Z23 238 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 TMEM156Q8N614 296 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 RELL2Q8NC24 303 aaPredicted RBP4.99□□□□□ -1.61
HOXB3-213ENST00000552000 LINC01560Q8TB33 94 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 SLC35G2Q8TBE7 412 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 MCOLN3Q8TDD5 553 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 FBF1Q8TES7 1133 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 SMPDL3AQ92484 453 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 SYN2Q92777 582 aaPredicted RBP4.99□□□□□ -1.61
HOXB3-213ENST00000552000 RNASE6Q93091 150 aaKnown RBP4.99□□□□□ -1.61
HOXB3-213ENST00000552000 LRRC46Q96FV0 321 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 PEX11GQ96HA9 241 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 CCDC138Q96M89 665 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 NAP1L5Q96NT1 182 aaPredicted RBP4.99□□□□□ -1.61
HOXB3-213ENST00000552000 SH3GL2Q99962 352 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 YIPF4Q9BSR8 244 aa4.99□□□□□ -1.61
HOXB3-213ENST00000552000 BDH2Q9BUT1 245 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms